New Upstream Snapshot - libbio-db-ace-perl
Ready changes
Summary
Merged new upstream version: 1.7.3+git20180924.1.a7e7fec (was: 1.7.3).
Resulting package
Built on 2022-11-03T10:24 (took 12m22s)
The resulting binary packages can be installed (if you have the apt repository enabled) by running one of:
apt install -t fresh-snapshots libbio-db-ace-perl
Lintian Result
Diff
diff --git a/Changes b/Changes
index 27b0d5d..2369c2e 100644
--- a/Changes
+++ b/Changes
@@ -1,5 +1,7 @@
Summary of important user-visible changes for Bio-DB-Ace
--------------------------------------------------------
+1.7.3 2022-11-03 10:20:12+00:00 UTC
+
1.7.3 2018-09-24 19:10:19-05:00 America/Chicago
* First release after split from bioperl-live.
diff --git a/LICENSE b/LICENSE
index 6e96c7e..9042be8 100644
--- a/LICENSE
+++ b/LICENSE
@@ -1,4 +1,4 @@
-This software is copyright (c) 2018 by Ewan Birney <birney@ebi.ac.uk>, Lincoln Stein <lstein@cshl.org>.
+This software is copyright (c) 2022 by Ewan Birney <birney@ebi.ac.uk>, Lincoln Stein <lstein@cshl.org>.
This is free software; you can redistribute it and/or modify it under
the same terms as the Perl 5 programming language system itself.
@@ -12,7 +12,7 @@ b) the "Artistic License"
--- The GNU General Public License, Version 1, February 1989 ---
-This software is Copyright (c) 2018 by Ewan Birney <birney@ebi.ac.uk>, Lincoln Stein <lstein@cshl.org>.
+This software is Copyright (c) 2022 by Ewan Birney <birney@ebi.ac.uk>, Lincoln Stein <lstein@cshl.org>.
This is free software, licensed under:
@@ -272,7 +272,7 @@ That's all there is to it!
--- The Artistic License 1.0 ---
-This software is Copyright (c) 2018 by Ewan Birney <birney@ebi.ac.uk>, Lincoln Stein <lstein@cshl.org>.
+This software is Copyright (c) 2022 by Ewan Birney <birney@ebi.ac.uk>, Lincoln Stein <lstein@cshl.org>.
This is free software, licensed under:
@@ -292,21 +292,21 @@ Definitions:
- "Package" refers to the collection of files distributed by the Copyright
Holder, and derivatives of that collection of files created through
- textual modification.
+ textual modification.
- "Standard Version" refers to such a Package if it has not been modified,
or has been modified in accordance with the wishes of the Copyright
- Holder.
+ Holder.
- "Copyright Holder" is whoever is named in the copyright or copyrights for
- the package.
+ the package.
- "You" is you, if you're thinking about copying or distributing this Package.
- "Reasonable copying fee" is whatever you can justify on the basis of media
cost, duplication charges, time of people involved, and so on. (You will
not be required to justify it to the Copyright Holder, but only to the
- computing community at large as a market that must bear the fee.)
+ computing community at large as a market that must bear the fee.)
- "Freely Available" means that no fee is charged for the item itself, though
there may be fees involved in handling the item. It also means that
recipients of the item may redistribute it under the same conditions they
- received it.
+ received it.
1. You may make and give away verbatim copies of the source form of the
Standard Version of this Package without restriction, provided that you
@@ -373,7 +373,7 @@ products derived from this software without specific prior written permission.
9. THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR IMPLIED
WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES OF
-MERCHANTIBILITY AND FITNESS FOR A PARTICULAR PURPOSE.
+MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
The End
diff --git a/MANIFEST b/MANIFEST
index 3fc7c26..403a8b3 100644
--- a/MANIFEST
+++ b/MANIFEST
@@ -1,4 +1,4 @@
-# This file was automatically generated by Dist::Zilla::Plugin::Manifest v6.010.
+# This file was automatically generated by Dist::Zilla::Plugin::Manifest v6.025.
Changes
LICENSE
MANIFEST
diff --git a/META.json b/META.json
index f243c07..2d6d19d 100644
--- a/META.json
+++ b/META.json
@@ -4,7 +4,7 @@
"Ewan Birney <birney@ebi.ac.uk>, Lincoln Stein <lstein@cshl.org>"
],
"dynamic_config" : 0,
- "generated_by" : "Dist::Zilla version 6.010, CPAN::Meta::Converter version 2.150010",
+ "generated_by" : "Dist::Zilla version 6.025, CPAN::Meta::Converter version 2.150010",
"license" : [
"perl_5"
],
@@ -67,7 +67,7 @@
"version" : "1.7.3",
"x_Dist_Zilla" : {
"perl" : {
- "version" : "5.026000"
+ "version" : "5.036000"
},
"plugins" : [
{
@@ -84,42 +84,42 @@
}
},
"name" : "@BioPerl/@Filter/GatherDir",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::PruneCruft",
"name" : "@BioPerl/@Filter/PruneCruft",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::ManifestSkip",
"name" : "@BioPerl/@Filter/ManifestSkip",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::MetaYAML",
"name" : "@BioPerl/@Filter/MetaYAML",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::License",
"name" : "@BioPerl/@Filter/License",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::ExtraTests",
"name" : "@BioPerl/@Filter/ExtraTests",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::ExecDir",
"name" : "@BioPerl/@Filter/ExecDir",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::ShareDir",
"name" : "@BioPerl/@Filter/ShareDir",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::MakeMaker",
@@ -129,47 +129,47 @@
}
},
"name" : "@BioPerl/@Filter/MakeMaker",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::Manifest",
"name" : "@BioPerl/@Filter/Manifest",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::TestRelease",
"name" : "@BioPerl/@Filter/TestRelease",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::ConfirmRelease",
"name" : "@BioPerl/@Filter/ConfirmRelease",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::UploadToCPAN",
"name" : "@BioPerl/@Filter/UploadToCPAN",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::MetaConfig",
"name" : "@BioPerl/MetaConfig",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::MetaJSON",
"name" : "@BioPerl/MetaJSON",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::PkgVersion",
"name" : "@BioPerl/PkgVersion",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::PodSyntaxTests",
"name" : "@BioPerl/PodSyntaxTests",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::Test::Compile",
@@ -192,7 +192,7 @@
}
},
"name" : "@BioPerl/Test::Compile",
- "version" : "2.057"
+ "version" : "2.058"
},
{
"class" : "Dist::Zilla::Plugin::MojibakeTests",
@@ -202,7 +202,7 @@
{
"class" : "Dist::Zilla::Plugin::AutoPrereqs",
"name" : "@BioPerl/AutoPrereqs",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::AutoMetaResources",
@@ -212,17 +212,17 @@
{
"class" : "Dist::Zilla::Plugin::MetaResources",
"name" : "@BioPerl/MetaResources",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::Encoding",
"name" : "@BioPerl/Encoding",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::NextRelease",
"name" : "@BioPerl/NextRelease",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::Git::Check",
@@ -239,19 +239,20 @@
"changelog" : "Changes"
},
"Dist::Zilla::Role::Git::Repo" : {
- "git_version" : "2.14.1",
+ "git_version" : "2.38.1",
"repo_root" : "."
}
},
"name" : "@BioPerl/Git::Check",
- "version" : "2.042"
+ "version" : "2.048"
},
{
"class" : "Dist::Zilla::Plugin::Git::Commit",
"config" : {
"Dist::Zilla::Plugin::Git::Commit" : {
"add_files_in" : [],
- "commit_msg" : "v%v%n%n%c"
+ "commit_msg" : "v%V%n%n%c",
+ "signoff" : 0
},
"Dist::Zilla::Role::Git::DirtyFiles" : {
"allow_dirty" : [
@@ -262,7 +263,7 @@
"changelog" : "Changes"
},
"Dist::Zilla::Role::Git::Repo" : {
- "git_version" : "2.14.1",
+ "git_version" : "2.38.1",
"repo_root" : "."
},
"Dist::Zilla::Role::Git::StringFormatter" : {
@@ -270,7 +271,7 @@
}
},
"name" : "@BioPerl/Git::Commit",
- "version" : "2.042"
+ "version" : "2.048"
},
{
"class" : "Dist::Zilla::Plugin::Git::Tag",
@@ -284,7 +285,7 @@
"tag_message" : "%N-v%v"
},
"Dist::Zilla::Role::Git::Repo" : {
- "git_version" : "2.14.1",
+ "git_version" : "2.38.1",
"repo_root" : "."
},
"Dist::Zilla::Role::Git::StringFormatter" : {
@@ -292,57 +293,57 @@
}
},
"name" : "@BioPerl/Git::Tag",
- "version" : "2.042"
+ "version" : "2.048"
},
{
"class" : "Dist::Zilla::Plugin::FinderCode",
"name" : ":InstallModules",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::FinderCode",
"name" : ":IncModules",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::FinderCode",
"name" : ":TestFiles",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::FinderCode",
"name" : ":ExtraTestFiles",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::FinderCode",
"name" : ":ExecFiles",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::FinderCode",
"name" : ":PerlExecFiles",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::FinderCode",
"name" : ":ShareFiles",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::FinderCode",
"name" : ":MainModule",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::FinderCode",
"name" : ":AllFiles",
- "version" : "6.010"
+ "version" : "6.025"
},
{
"class" : "Dist::Zilla::Plugin::FinderCode",
"name" : ":NoFiles",
- "version" : "6.010"
+ "version" : "6.025"
}
],
"zilla" : {
@@ -350,9 +351,11 @@
"config" : {
"is_trial" : 0
},
- "version" : "6.010"
+ "version" : "6.025"
}
},
- "x_serialization_backend" : "Cpanel::JSON::XS version 3.0239"
+ "x_generated_by_perl" : "v5.36.0",
+ "x_serialization_backend" : "Cpanel::JSON::XS version 4.32",
+ "x_spdx_expression" : "Artistic-1.0-Perl OR GPL-1.0-or-later"
}
diff --git a/META.yml b/META.yml
index 2a8ab7f..2e8912b 100644
--- a/META.yml
+++ b/META.yml
@@ -11,7 +11,7 @@ build_requires:
configure_requires:
ExtUtils::MakeMaker: '0'
dynamic_config: 0
-generated_by: 'Dist::Zilla version 6.010, CPAN::Meta::Converter version 2.150010'
+generated_by: 'Dist::Zilla version 6.025, CPAN::Meta::Converter version 2.150010'
license: perl
meta-spec:
url: http://module-build.sourceforge.net/META-spec-v1.4.html
@@ -37,7 +37,7 @@ resources:
version: 1.7.3
x_Dist_Zilla:
perl:
- version: '5.026000'
+ version: '5.036000'
plugins:
-
class: Dist::Zilla::Plugin::GatherDir
@@ -51,79 +51,79 @@ x_Dist_Zilla:
prune_directory: []
root: .
name: '@BioPerl/@Filter/GatherDir'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::PruneCruft
name: '@BioPerl/@Filter/PruneCruft'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::ManifestSkip
name: '@BioPerl/@Filter/ManifestSkip'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::MetaYAML
name: '@BioPerl/@Filter/MetaYAML'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::License
name: '@BioPerl/@Filter/License'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::ExtraTests
name: '@BioPerl/@Filter/ExtraTests'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::ExecDir
name: '@BioPerl/@Filter/ExecDir'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::ShareDir
name: '@BioPerl/@Filter/ShareDir'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::MakeMaker
config:
Dist::Zilla::Role::TestRunner:
default_jobs: 1
name: '@BioPerl/@Filter/MakeMaker'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::Manifest
name: '@BioPerl/@Filter/Manifest'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::TestRelease
name: '@BioPerl/@Filter/TestRelease'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::ConfirmRelease
name: '@BioPerl/@Filter/ConfirmRelease'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::UploadToCPAN
name: '@BioPerl/@Filter/UploadToCPAN'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::MetaConfig
name: '@BioPerl/MetaConfig'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::MetaJSON
name: '@BioPerl/MetaJSON'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::PkgVersion
name: '@BioPerl/PkgVersion'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::PodSyntaxTests
name: '@BioPerl/PodSyntaxTests'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::Test::Compile
config:
Dist::Zilla::Plugin::Test::Compile:
- bail_out_on_fail: '0'
+ bail_out_on_fail: 0
fail_on_warning: author
fake_home: 0
filename: t/00-compile.t
@@ -136,7 +136,7 @@ x_Dist_Zilla:
skips: []
switch: []
name: '@BioPerl/Test::Compile'
- version: '2.057'
+ version: '2.058'
-
class: Dist::Zilla::Plugin::MojibakeTests
name: '@BioPerl/MojibakeTests'
@@ -144,7 +144,7 @@ x_Dist_Zilla:
-
class: Dist::Zilla::Plugin::AutoPrereqs
name: '@BioPerl/AutoPrereqs'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::AutoMetaResources
name: '@BioPerl/AutoMetaResources'
@@ -152,15 +152,15 @@ x_Dist_Zilla:
-
class: Dist::Zilla::Plugin::MetaResources
name: '@BioPerl/MetaResources'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::Encoding
name: '@BioPerl/Encoding'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::NextRelease
name: '@BioPerl/NextRelease'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::Git::Check
config:
@@ -173,16 +173,17 @@ x_Dist_Zilla:
allow_dirty_match: []
changelog: Changes
Dist::Zilla::Role::Git::Repo:
- git_version: 2.14.1
+ git_version: 2.38.1
repo_root: .
name: '@BioPerl/Git::Check'
- version: '2.042'
+ version: '2.048'
-
class: Dist::Zilla::Plugin::Git::Commit
config:
Dist::Zilla::Plugin::Git::Commit:
add_files_in: []
- commit_msg: v%v%n%n%c
+ commit_msg: v%V%n%n%c
+ signoff: 0
Dist::Zilla::Role::Git::DirtyFiles:
allow_dirty:
- Changes
@@ -190,12 +191,12 @@ x_Dist_Zilla:
allow_dirty_match: []
changelog: Changes
Dist::Zilla::Role::Git::Repo:
- git_version: 2.14.1
+ git_version: 2.38.1
repo_root: .
Dist::Zilla::Role::Git::StringFormatter:
time_zone: local
name: '@BioPerl/Git::Commit'
- version: '2.042'
+ version: '2.048'
-
class: Dist::Zilla::Plugin::Git::Tag
config:
@@ -207,55 +208,57 @@ x_Dist_Zilla:
tag_format: '%N-v%v'
tag_message: '%N-v%v'
Dist::Zilla::Role::Git::Repo:
- git_version: 2.14.1
+ git_version: 2.38.1
repo_root: .
Dist::Zilla::Role::Git::StringFormatter:
time_zone: local
name: '@BioPerl/Git::Tag'
- version: '2.042'
+ version: '2.048'
-
class: Dist::Zilla::Plugin::FinderCode
name: ':InstallModules'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::FinderCode
name: ':IncModules'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::FinderCode
name: ':TestFiles'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::FinderCode
name: ':ExtraTestFiles'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::FinderCode
name: ':ExecFiles'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::FinderCode
name: ':PerlExecFiles'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::FinderCode
name: ':ShareFiles'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::FinderCode
name: ':MainModule'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::FinderCode
name: ':AllFiles'
- version: '6.010'
+ version: '6.025'
-
class: Dist::Zilla::Plugin::FinderCode
name: ':NoFiles'
- version: '6.010'
+ version: '6.025'
zilla:
class: Dist::Zilla::Dist::Builder
config:
- is_trial: '0'
- version: '6.010'
-x_serialization_backend: 'YAML::Tiny version 1.70'
+ is_trial: 0
+ version: '6.025'
+x_generated_by_perl: v5.36.0
+x_serialization_backend: 'YAML::Tiny version 1.73'
+x_spdx_expression: 'Artistic-1.0-Perl OR GPL-1.0-or-later'
diff --git a/Makefile.PL b/Makefile.PL
index 958dff8..5b32474 100644
--- a/Makefile.PL
+++ b/Makefile.PL
@@ -1,4 +1,4 @@
-# This file was automatically generated by Dist::Zilla::Plugin::MakeMaker v6.010.
+# This file was automatically generated by Dist::Zilla::Plugin::MakeMaker v6.025.
use strict;
use warnings;
diff --git a/debian/changelog b/debian/changelog
index d8c1440..d3fd089 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,9 @@
+libbio-db-ace-perl (1.7.3+git20180924.1.a7e7fec-1) UNRELEASED; urgency=low
+
+ * New upstream snapshot.
+
+ -- Debian Janitor <janitor@jelmer.uk> Thu, 03 Nov 2022 10:20:29 -0000
+
libbio-db-ace-perl (1.7.3-2) unstable; urgency=medium
* Post-acceptance, source only upload (no changes).
diff --git a/t/00-compile.t b/t/00-compile.t
index 0eef315..4f1b70b 100644
--- a/t/00-compile.t
+++ b/t/00-compile.t
@@ -2,7 +2,7 @@ use 5.006;
use strict;
use warnings;
-# this test was generated with Dist::Zilla::Plugin::Test::Compile 2.057
+# this test was generated with Dist::Zilla::Plugin::Test::Compile 2.058
use Test::More;
@@ -65,6 +65,9 @@ foreach my $file (@scripts)
close $fh and skip("$file isn't perl", 1) unless $line =~ /^#!\s*(?:\S*perl\S*)((?:\s+-\w*)*)(?:\s*#.*)?$/;
@switches = (@switches, split(' ', $1)) if $1;
+ close $fh and skip("$file uses -T; not testable with PERL5LIB", 1)
+ if grep { $_ eq '-T' } @switches and $ENV{PERL5LIB};
+
my $stderr = IO::Handle->new;
diag('Running: ', join(', ', map { my $str = $_; $str =~ s/'/\\'/g; q{'} . $str . q{'} }
Debdiff
File lists identical (after any substitutions)
No differences were encountered in the control files