32.3 KB
genomethreader version 1.7.3+dfsg-5~jan+unchanged1 (unchanged) vs.
genomethreader version 1.7.3+dfsg-6~jan+lint1 (lintian-fixes)
16.1 KB
genomethreader-dbgsym_1.7.3+dfsg-5~jan+unchanged1_amd64.deb vs.
genomethreader_1.7.3+dfsg-6~jan+lint1_amd64.deb
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1 -rw-r--r--···0········0········0········4·2020-02-08·15:05:30.000000·debian-binary1 -rw-r--r--···0········0········0········4·2020-02-08·15:05:30.000000·debian-binary
2 -rw-r--r--···0········0········0·····1168·2020-02-08·15:05:30.000000·control.tar.xz2 -rw-r--r--···0········0········0·····2000·2020-02-08·15:05:30.000000·control.tar.xz
3 -rw-r--r--···0········0········0··1519580·2020-02-08·15:05:30.000000·data.tar.xz3 -rw-r--r--···0········0········0··2059912·2020-02-08·15:05:30.000000·data.tar.xz
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control.tar.xz
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control.tar
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1 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./1 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./
2 -rw-r--r--···0·root·········(0)·root·········(0)······890·2020-02-08·15:05:30.000000·./control2 -rw-r--r--···0·root·········(0)·root·········(0)······893·2020-02-08·15:05:30.000000·./control
3 -rw-r--r--···0·root·········(0)·root·········(0)·····1363·2020-02-08·15:05:30.000000·./md5sums3 -rw-r--r--···0·root·········(0)·root·········(0)·····3091·2020-02-08·15:05:30.000000·./md5sums
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./control
    
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1 Package:·genomethreader-dbgsym1 Package:·genomethreader
2 Source:·genomethreader 
3 Version:·1.7.3+dfsg-5~jan+unchanged12 Version:·1.7.3+dfsg-6~jan+lint1
4 Auto-Built-Package:·debug-symbols 
5 Architecture:·amd643 Architecture:·amd64
6 Maintainer:·Debian·Med·Packaging·Team·<debian-med-packaging@lists.alioth.debian.org>4 Maintainer:·Debian·Med·Packaging·Team·<debian-med-packaging@lists.alioth.debian.org>
7 Installed-Size:·20515 Installed-Size:·22349
8 Depends:·genomethreader·(=·1.7.3+dfsg-5~jan+unchanged1) 
9 Section:·debug6 Depends:·libc6·(>=·2.29),·libexpat1·(>=·2.0.1),·libgenometools0·(>=·1.6.1+ds),·liblua5.1-0,·zlib1g·(>=·1:1.2.3.3)
 7 Built-Using:·vmatch·(=·2.3.1+dfsg-6)
 8 Section:·science
10 Priority:·optional9 Priority:·optional
11 Description:·debug·symbols·for·genomethreader 
12 Build-Ids:·021393b34fcffaec4f34dce55fb9062662b20ea9·0a39ba013274c1932dd8126ba2af795d6e90de19·11d2b4c8eb77a86883fe45b9b1f1553ed0b4a52a·28060dfef01e8cfbc87b96ec364e94f262e19c36·684ed1a45f0453dd86e970cb7067243269f6f278·69d5f4f051f466e64265df85380184c328b4b3fb·851f1523005ab4ae201f8c62379695cd37bf3166·acafc10193aac0bd4ed90bad9abaf8aac3a0c558·bd7094bfe76cc1b2fcbb01d778d0fa23c051db22·e4cc7ce198c32a531d205a5e33526e3f003d40cc·f40fa1a40a4979574637e24cd6d3f00840311456·fa0cbee46cd76183927ad5cae3be3c976b28b11b10 Homepage:·http://genomethreader.org
 11 Description:·software·tool·to·compute·gene·structure·predictions
 12 ·GenomeThreader·is·a·software·tool·to·compute·gene·structure·predictions.
 13 ·The·gene·structure·predictions·are·calculated·using·a·similarity-based
 14 ·approach·where·additional·cDNA/EST·and/or·protein·sequences·are·used·to
 15 ·predict·gene·structures·via·spliced·alignments.·GenomeThreader·was·motivated
 16 ·by·disabling·limitations·in·GeneSeqer,·a·popular·gene·prediction·program
 17 ·which·is·widely·used·for·plant·genome·annotation.
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./md5sums
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./md5sums
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1 usr/lib/debug/.build-id/02/1393b34fcffaec4f34dce55fb9062662b20ea9.debug 
2 usr/lib/debug/.build-id/0a/39ba013274c1932dd8126ba2af795d6e90de19.debug 
3 usr/lib/debug/.build-id/11/d2b4c8eb77a86883fe45b9b1f1553ed0b4a52a.debug 
4 usr/lib/debug/.build-id/28/060dfef01e8cfbc87b96ec364e94f262e19c36.debug 
5 usr/lib/debug/.build-id/68/4ed1a45f0453dd86e970cb7067243269f6f278.debug 
6 usr/lib/debug/.build-id/69/d5f4f051f466e64265df85380184c328b4b3fb.debug 
7 usr/lib/debug/.build-id/85/1f1523005ab4ae201f8c62379695cd37bf3166.debug 
8 usr/lib/debug/.build-id/ac/afc10193aac0bd4ed90bad9abaf8aac3a0c558.debug 
9 usr/lib/debug/.build-id/bd/7094bfe76cc1b2fcbb01d778d0fa23c051db22.debug 
10 usr/lib/debug/.build-id/e4/cc7ce198c32a531d205a5e33526e3f003d40cc.debug 
11 usr/lib/debug/.build-id/f4/0fa1a40a4979574637e24cd6d3f00840311456.debug 
12 usr/lib/debug/.build-id/fa/0cbee46cd76183927ad5cae3be3c976b28b11b.debug 
13 usr/lib/debug/.dwz/x86_64-linux-gnu/genomethreader.debug1 usr/bin/align_dna
 2 usr/bin/gth
 3 usr/bin/gthbssmbuild
 4 usr/bin/gthbssmfileinfo
 5 usr/bin/gthbssmprint
 6 usr/bin/gthbssmrmsd
 7 usr/bin/gthbssmtrain
 8 usr/bin/gthconsensus
 9 usr/bin/gthfilestat
 10 usr/bin/gthgetseq
 11 usr/bin/gthmkbssmfiles
 12 usr/bin/gthsplit
 13 usr/lib/genomethreader/bssm/arabidopsis.bssm
 14 usr/lib/genomethreader/bssm/arabidopsis.old.bssm
 15 usr/lib/genomethreader/bssm/aspergillus.bssm
 16 usr/lib/genomethreader/bssm/chicken.bssm
 17 usr/lib/genomethreader/bssm/drosophila.bssm
 18 usr/lib/genomethreader/bssm/fission_yeast.bssm
 19 usr/lib/genomethreader/bssm/human.bssm
 20 usr/lib/genomethreader/bssm/maize.bssm
 21 usr/lib/genomethreader/bssm/maize.old.bssm
 22 usr/lib/genomethreader/bssm/medicago.bssm
 23 usr/lib/genomethreader/bssm/mouse.bssm
 24 usr/lib/genomethreader/bssm/nematode.bssm
 25 usr/lib/genomethreader/bssm/rat.bssm
 26 usr/lib/genomethreader/bssm/rice.bssm
 27 usr/share/doc/genomethreader/changelog.Debian.gz
 28 usr/share/doc/genomethreader/changelog.gz
 29 usr/share/doc/genomethreader/copyright
 30 usr/share/genomethreader/gthdata/BLOSUM62
 31 usr/share/genomethreader/gthdata/TransDNAX
 32 usr/share/genomethreader/gthdata/TransProt11
 33 usr/share/genomethreader/gthdata/polyatail.dna
 34 usr/share/man/man1/align_dna.1.gz
 35 usr/share/man/man1/gth.1.gz
 36 usr/share/man/man1/gthbssmbuild.1.gz
 37 usr/share/man/man1/gthbssmfileinfo.1.gz
 38 usr/share/man/man1/gthbssmprint.1.gz
 39 usr/share/man/man1/gthbssmrmsd.1.gz
 40 usr/share/man/man1/gthbssmtrain.1.gz
 41 usr/share/man/man1/gthconsensus.1.gz
 42 usr/share/man/man1/gthfilestat.1.gz
 43 usr/share/man/man1/gthgetseq.1.gz
 44 usr/share/man/man1/gthmkbssmfiles.1.gz
 45 usr/share/man/man1/gthsplit.1.gz
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data.tar.xz
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data.tar
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1 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./1 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./
2 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/2 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/
 3 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/bin/
 4 -rwxr-xr-x···0·root·········(0)·root·········(0)··2359224·2020-02-08·15:05:30.000000·./usr/bin/align_dna
 5 -rwxr-xr-x···0·root·········(0)·root·········(0)··2547736·2020-02-08·15:05:30.000000·./usr/bin/gth
 6 -rwxr-xr-x···0·root·········(0)·root·········(0)··1603872·2020-02-08·15:05:30.000000·./usr/bin/gthbssmbuild
 7 -rwxr-xr-x···0·root·········(0)·root·········(0)··1603872·2020-02-08·15:05:30.000000·./usr/bin/gthbssmfileinfo
 8 -rwxr-xr-x···0·root·········(0)·root·········(0)··1603872·2020-02-08·15:05:30.000000·./usr/bin/gthbssmprint
 9 -rwxr-xr-x···0·root·········(0)·root·········(0)··1603872·2020-02-08·15:05:30.000000·./usr/bin/gthbssmrmsd
 10 -rwxr-xr-x···0·root·········(0)·root·········(0)····55456·2020-02-08·15:05:30.000000·./usr/bin/gthbssmtrain
 11 -rwxr-xr-x···0·root·········(0)·root·········(0)··2420760·2020-02-08·15:05:30.000000·./usr/bin/gthconsensus
 12 -rwxr-xr-x···0·root·········(0)·root·········(0)···757688·2020-02-08·15:05:30.000000·./usr/bin/gthfilestat
 13 -rwxr-xr-x···0·root·········(0)·root·········(0)···745400·2020-02-08·15:05:30.000000·./usr/bin/gthgetseq
 14 -rwxr-xr-x···0·root·········(0)·root·········(0)··1603872·2020-02-08·15:05:30.000000·./usr/bin/gthmkbssmfiles
 15 -rwxr-xr-x···0·root·········(0)·root·········(0)···753592·2020-02-08·15:05:30.000000·./usr/bin/gthsplit
3 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/16 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/
4 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/17 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/
5 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/ 
6 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/02/ 
7 -rw-r--r--···0·root·········(0)·root·········(0)···258288·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/02/1393b34fcffaec4f34dce55fb9062662b20ea9.debug 
8 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/0a/ 
9 -rw-r--r--···0·root·········(0)·root·········(0)···343536·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/0a/39ba013274c1932dd8126ba2af795d6e90de19.debug 
10 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/11/ 
11 -rw-r--r--···0·root·········(0)·root·········(0)···239392·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/11/d2b4c8eb77a86883fe45b9b1f1553ed0b4a52a.debug 
12 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/28/ 
13 -rw-r--r--···0·root·········(0)·root·········(0)···452680·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/28/060dfef01e8cfbc87b96ec364e94f262e19c36.debug 
14 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/68/ 
15 -rw-r--r--···0·root·········(0)·root·········(0)····28936·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/68/4ed1a45f0453dd86e970cb7067243269f6f278.debug 
16 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/69/ 
17 -rw-r--r--···0·root·········(0)·root·········(0)····50528·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/69/d5f4f051f466e64265df85380184c328b4b3fb.debug 
18 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/85/ 
19 -rw-r--r--···0·root·········(0)·root·········(0)····26736·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/85/1f1523005ab4ae201f8c62379695cd37bf3166.debug 
20 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/ac/ 
21 -rw-r--r--···0·root·········(0)·root·········(0)···300896·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/ac/afc10193aac0bd4ed90bad9abaf8aac3a0c558.debug 
22 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/bd/ 
23 -rw-r--r--···0·root·········(0)·root·········(0)···244360·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/bd/7094bfe76cc1b2fcbb01d778d0fa23c051db22.debug 
24 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/e4/ 
25 -rw-r--r--···0·root·········(0)·root·········(0)····27600·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/e4/cc7ce198c32a531d205a5e33526e3f003d40cc.debug 
26 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/f4/ 
27 -rw-r--r--···0·root·········(0)·root·········(0)····27576·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/f4/0fa1a40a4979574637e24cd6d3f00840311456.debug 
28 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/fa/ 
29 -rw-r--r--···0·root·········(0)·root·········(0)····29304·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/fa/0cbee46cd76183927ad5cae3be3c976b28b11b.debug 
30 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.dwz/18 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/
31 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.dwz/x86_64-linux-gnu/19 -rw-r--r--···0·root·········(0)·root·········(0)···551095·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/arabidopsis.bssm
 20 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/arabidopsis.old.bssm
 21 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/aspergillus.bssm
 22 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/chicken.bssm
 23 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/drosophila.bssm
 24 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/fission_yeast.bssm
 25 -rw-r--r--···0·root·········(0)·root·········(0)···105131·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/human.bssm
 26 -rw-r--r--···0·root·········(0)·root·········(0)···551095·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/maize.bssm
 27 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/maize.old.bssm
 28 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/medicago.bssm
 29 -rw-r--r--···0·root·········(0)·root·········(0)···105131·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/mouse.bssm
 30 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/nematode.bssm
32 -rw-r--r--···0·root·········(0)·root·········(0)····40272·2020-02-08·15:05:30.000000·./usr/lib/debug/.dwz/x86_64-linux-gnu/genomethreader.debug31 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/rat.bssm
 32 -rw-r--r--···0·root·········(0)·root·········(0)···551095·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/rice.bssm
33 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/33 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/
34 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/doc/34 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/doc/
35 lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/doc/genomethreader-dbgsym·->·genomethreader35 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/doc/genomethreader/
 36 -rw-r--r--···0·root·········(0)·root·········(0)······616·2020-02-08·15:05:30.000000·./usr/share/doc/genomethreader/changelog.Debian.gz
 37 -rw-r--r--···0·root·········(0)·root·········(0)·····1993·2020-01-09·18:41:40.000000·./usr/share/doc/genomethreader/changelog.gz
 38 -rw-r--r--···0·root·········(0)·root·········(0)·····3339·2020-02-08·15:05:30.000000·./usr/share/doc/genomethreader/copyright
 39 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/genomethreader/
 40 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/genomethreader/gthdata/
 41 -rw-r--r--···0·root·········(0)·root·········(0)·····2122·2020-02-08·15:05:30.000000·./usr/share/genomethreader/gthdata/BLOSUM62
 42 -rw-r--r--···0·root·········(0)·root·········(0)·······39·2020-02-08·15:05:30.000000·./usr/share/genomethreader/gthdata/TransDNAX
 43 -rw-r--r--···0·root·········(0)·root·········(0)······146·2020-02-08·15:05:30.000000·./usr/share/genomethreader/gthdata/TransProt11
 44 -rw-r--r--···0·root·········(0)·root·········(0)······290·2020-02-08·15:05:30.000000·./usr/share/genomethreader/gthdata/polyatail.dna
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 54 -rw-r--r--···0·root·········(0)·root·········(0)······942·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthconsensus.1.gz
 55 -rw-r--r--···0·root·········(0)·root·········(0)······623·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthfilestat.1.gz
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genomethreader_1.7.3+dfsg-5~jan+unchanged1_amd64.deb vs.
genomethreader-dbgsym_1.7.3+dfsg-6~jan+lint1_amd64.deb
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2 -rw-r--r--···0········0········0·····2004·2020-02-08·15:05:30.000000·control.tar.xz2 -rw-r--r--···0········0········0·····1164·2020-02-08·15:05:30.000000·control.tar.xz
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2 -rw-r--r--···0·root·········(0)·root·········(0)······898·2020-02-08·15:05:30.000000·./control2 -rw-r--r--···0·root·········(0)·root·········(0)······880·2020-02-08·15:05:30.000000·./control
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1 Package:·genomethreader1 Package:·genomethreader-dbgsym
 2 Source:·genomethreader
2 Version:·1.7.3+dfsg-5~jan+unchanged13 Version:·1.7.3+dfsg-6~jan+lint1
 4 Auto-Built-Package:·debug-symbols
3 Architecture:·amd645 Architecture:·amd64
4 Maintainer:·Debian·Med·Packaging·Team·<debian-med-packaging@lists.alioth.debian.org>6 Maintainer:·Debian·Med·Packaging·Team·<debian-med-packaging@lists.alioth.debian.org>
5 Installed-Size:·223497 Installed-Size:·2051
 8 Depends:·genomethreader·(=·1.7.3+dfsg-6~jan+lint1)
 9 Section:·debug
6 Depends:·libc6·(>=·2.29),·libexpat1·(>=·2.0.1),·libgenometools0·(>=·1.6.1+ds),·liblua5.1-0,·zlib1g·(>=·1:1.2.3.3) 
7 Built-Using:·vmatch·(=·2.3.1+dfsg-6) 
8 Section:·science 
9 Priority:·optional10 Priority:·optional
 11 Description:·debug·symbols·for·genomethreader
 12 Build-Ids:·021393b34fcffaec4f34dce55fb9062662b20ea9·0a39ba013274c1932dd8126ba2af795d6e90de19·11d2b4c8eb77a86883fe45b9b1f1553ed0b4a52a·28060dfef01e8cfbc87b96ec364e94f262e19c36·684ed1a45f0453dd86e970cb7067243269f6f278·69d5f4f051f466e64265df85380184c328b4b3fb·851f1523005ab4ae201f8c62379695cd37bf3166·acafc10193aac0bd4ed90bad9abaf8aac3a0c558·bd7094bfe76cc1b2fcbb01d778d0fa23c051db22·e4cc7ce198c32a531d205a5e33526e3f003d40cc·f40fa1a40a4979574637e24cd6d3f00840311456·fa0cbee46cd76183927ad5cae3be3c976b28b11b
10 Homepage:·http://genomethreader.org 
11 Description:·software·tool·to·compute·gene·structure·predictions 
12 ·GenomeThreader·is·a·software·tool·to·compute·gene·structure·predictions. 
13 ·The·gene·structure·predictions·are·calculated·using·a·similarity-based 
14 ·approach·where·additional·cDNA/EST·and/or·protein·sequences·are·used·to 
15 ·predict·gene·structures·via·spliced·alignments.·GenomeThreader·was·motivated 
16 ·by·disabling·limitations·in·GeneSeqer,·a·popular·gene·prediction·program 
17 ·which·is·widely·used·for·plant·genome·annotation. 
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 1 usr/lib/debug/.build-id/02/1393b34fcffaec4f34dce55fb9062662b20ea9.debug
 2 usr/lib/debug/.build-id/0a/39ba013274c1932dd8126ba2af795d6e90de19.debug
 3 usr/lib/debug/.build-id/11/d2b4c8eb77a86883fe45b9b1f1553ed0b4a52a.debug
 4 usr/lib/debug/.build-id/28/060dfef01e8cfbc87b96ec364e94f262e19c36.debug
 5 usr/lib/debug/.build-id/68/4ed1a45f0453dd86e970cb7067243269f6f278.debug
 6 usr/lib/debug/.build-id/69/d5f4f051f466e64265df85380184c328b4b3fb.debug
 7 usr/lib/debug/.build-id/85/1f1523005ab4ae201f8c62379695cd37bf3166.debug
 8 usr/lib/debug/.build-id/ac/afc10193aac0bd4ed90bad9abaf8aac3a0c558.debug
 9 usr/lib/debug/.build-id/bd/7094bfe76cc1b2fcbb01d778d0fa23c051db22.debug
 10 usr/lib/debug/.build-id/e4/cc7ce198c32a531d205a5e33526e3f003d40cc.debug
 11 usr/lib/debug/.build-id/f4/0fa1a40a4979574637e24cd6d3f00840311456.debug
 12 usr/lib/debug/.build-id/fa/0cbee46cd76183927ad5cae3be3c976b28b11b.debug
 13 usr/lib/debug/.dwz/x86_64-linux-gnu/genomethreader.debug
1 usr/bin/align_dna 
2 usr/bin/gth 
3 usr/bin/gthbssmbuild 
4 usr/bin/gthbssmfileinfo 
5 usr/bin/gthbssmprint 
6 usr/bin/gthbssmrmsd 
7 usr/bin/gthbssmtrain 
8 usr/bin/gthconsensus 
9 usr/bin/gthfilestat 
10 usr/bin/gthgetseq 
11 usr/bin/gthmkbssmfiles 
12 usr/bin/gthsplit 
13 usr/lib/genomethreader/bssm/arabidopsis.bssm 
14 usr/lib/genomethreader/bssm/arabidopsis.old.bssm 
15 usr/lib/genomethreader/bssm/aspergillus.bssm 
16 usr/lib/genomethreader/bssm/chicken.bssm 
17 usr/lib/genomethreader/bssm/drosophila.bssm 
18 usr/lib/genomethreader/bssm/fission_yeast.bssm 
19 usr/lib/genomethreader/bssm/human.bssm 
20 usr/lib/genomethreader/bssm/maize.bssm 
21 usr/lib/genomethreader/bssm/maize.old.bssm 
22 usr/lib/genomethreader/bssm/medicago.bssm 
23 usr/lib/genomethreader/bssm/mouse.bssm 
24 usr/lib/genomethreader/bssm/nematode.bssm 
25 usr/lib/genomethreader/bssm/rat.bssm 
26 usr/lib/genomethreader/bssm/rice.bssm 
27 usr/share/doc/genomethreader/changelog.Debian.gz 
28 usr/share/doc/genomethreader/changelog.gz 
29 usr/share/doc/genomethreader/copyright 
30 usr/share/genomethreader/gthdata/BLOSUM62 
31 usr/share/genomethreader/gthdata/TransDNAX 
32 usr/share/genomethreader/gthdata/TransProt11 
33 usr/share/genomethreader/gthdata/polyatail.dna 
34 usr/share/man/man1/align_dna.1.gz 
35 usr/share/man/man1/gth.1.gz 
36 usr/share/man/man1/gthbssmbuild.1.gz 
37 usr/share/man/man1/gthbssmfileinfo.1.gz 
38 usr/share/man/man1/gthbssmprint.1.gz 
39 usr/share/man/man1/gthbssmrmsd.1.gz 
40 usr/share/man/man1/gthbssmtrain.1.gz 
41 usr/share/man/man1/gthconsensus.1.gz 
42 usr/share/man/man1/gthfilestat.1.gz 
43 usr/share/man/man1/gthgetseq.1.gz 
44 usr/share/man/man1/gthmkbssmfiles.1.gz 
45 usr/share/man/man1/gthsplit.1.gz 
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2 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/2 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/
3 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/bin/ 
4 -rwxr-xr-x···0·root·········(0)·root·········(0)··2359224·2020-02-08·15:05:30.000000·./usr/bin/align_dna 
5 -rwxr-xr-x···0·root·········(0)·root·········(0)··2547736·2020-02-08·15:05:30.000000·./usr/bin/gth 
6 -rwxr-xr-x···0·root·········(0)·root·········(0)··1603872·2020-02-08·15:05:30.000000·./usr/bin/gthbssmbuild 
7 -rwxr-xr-x···0·root·········(0)·root·········(0)··1603872·2020-02-08·15:05:30.000000·./usr/bin/gthbssmfileinfo 
8 -rwxr-xr-x···0·root·········(0)·root·········(0)··1603872·2020-02-08·15:05:30.000000·./usr/bin/gthbssmprint 
9 -rwxr-xr-x···0·root·········(0)·root·········(0)··1603872·2020-02-08·15:05:30.000000·./usr/bin/gthbssmrmsd 
10 -rwxr-xr-x···0·root·········(0)·root·········(0)····55456·2020-02-08·15:05:30.000000·./usr/bin/gthbssmtrain 
11 -rwxr-xr-x···0·root·········(0)·root·········(0)··2420760·2020-02-08·15:05:30.000000·./usr/bin/gthconsensus 
12 -rwxr-xr-x···0·root·········(0)·root·········(0)···757688·2020-02-08·15:05:30.000000·./usr/bin/gthfilestat 
13 -rwxr-xr-x···0·root·········(0)·root·········(0)···745400·2020-02-08·15:05:30.000000·./usr/bin/gthgetseq 
14 -rwxr-xr-x···0·root·········(0)·root·········(0)··1603872·2020-02-08·15:05:30.000000·./usr/bin/gthmkbssmfiles 
15 -rwxr-xr-x···0·root·········(0)·root·········(0)···753592·2020-02-08·15:05:30.000000·./usr/bin/gthsplit 
16 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/3 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/
17 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/4 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/
 5 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/
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 24 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.build-id/e4/
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18 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/30 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/lib/debug/.dwz/
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19 -rw-r--r--···0·root·········(0)·root·········(0)···551095·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/arabidopsis.bssm 
20 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/arabidopsis.old.bssm 
21 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/aspergillus.bssm 
22 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/chicken.bssm 
23 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/drosophila.bssm 
24 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/fission_yeast.bssm 
25 -rw-r--r--···0·root·········(0)·root·········(0)···105131·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/human.bssm 
26 -rw-r--r--···0·root·········(0)·root·········(0)···551095·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/maize.bssm 
27 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/maize.old.bssm 
28 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/medicago.bssm 
29 -rw-r--r--···0·root·········(0)·root·········(0)···105131·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/mouse.bssm 
30 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/nematode.bssm32 -rw-r--r--···0·root·········(0)·root·········(0)····40272·2020-02-08·15:05:30.000000·./usr/lib/debug/.dwz/x86_64-linux-gnu/genomethreader.debug
31 -rw-r--r--···0·root·········(0)·root·········(0)···367401·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/rat.bssm 
32 -rw-r--r--···0·root·········(0)·root·········(0)···551095·2020-02-08·15:05:30.000000·./usr/lib/genomethreader/bssm/rice.bssm 
33 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/33 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/
34 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/doc/34 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/doc/
35 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/doc/genomethreader/35 lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/doc/genomethreader-dbgsym·->·genomethreader
36 -rw-r--r--···0·root·········(0)·root·········(0)······557·2020-02-08·15:05:30.000000·./usr/share/doc/genomethreader/changelog.Debian.gz 
37 -rw-r--r--···0·root·········(0)·root·········(0)·····1993·2020-01-09·18:41:40.000000·./usr/share/doc/genomethreader/changelog.gz 
38 -rw-r--r--···0·root·········(0)·root·········(0)·····3339·2020-02-08·15:05:30.000000·./usr/share/doc/genomethreader/copyright 
39 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/genomethreader/ 
40 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/genomethreader/gthdata/ 
41 -rw-r--r--···0·root·········(0)·root·········(0)·····2122·2020-02-08·15:05:30.000000·./usr/share/genomethreader/gthdata/BLOSUM62 
42 -rw-r--r--···0·root·········(0)·root·········(0)·······39·2020-02-08·15:05:30.000000·./usr/share/genomethreader/gthdata/TransDNAX 
43 -rw-r--r--···0·root·········(0)·root·········(0)······146·2020-02-08·15:05:30.000000·./usr/share/genomethreader/gthdata/TransProt11 
44 -rw-r--r--···0·root·········(0)·root·········(0)······290·2020-02-08·15:05:30.000000·./usr/share/genomethreader/gthdata/polyatail.dna 
45 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/man/ 
46 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-02-08·15:05:30.000000·./usr/share/man/man1/ 
47 -rw-r--r--···0·root·········(0)·root·········(0)······508·2020-02-08·15:05:30.000000·./usr/share/man/man1/align_dna.1.gz 
48 -rw-r--r--···0·root·········(0)·root·········(0)·····3181·2020-02-08·15:05:30.000000·./usr/share/man/man1/gth.1.gz 
49 -rw-r--r--···0·root·········(0)·root·········(0)······630·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthbssmbuild.1.gz 
50 -rw-r--r--···0·root·········(0)·root·········(0)······476·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthbssmfileinfo.1.gz 
51 -rw-r--r--···0·root·········(0)·root·········(0)······462·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthbssmprint.1.gz 
52 -rw-r--r--···0·root·········(0)·root·········(0)······483·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthbssmrmsd.1.gz 
53 -rw-r--r--···0·root·········(0)·root·········(0)·····1230·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthbssmtrain.1.gz 
54 -rw-r--r--···0·root·········(0)·root·········(0)······942·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthconsensus.1.gz 
55 -rw-r--r--···0·root·········(0)·root·········(0)······623·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthfilestat.1.gz 
56 -rw-r--r--···0·root·········(0)·root·········(0)······728·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthgetseq.1.gz 
57 -rw-r--r--···0·root·········(0)·root·········(0)······459·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthmkbssmfiles.1.gz 
58 -rw-r--r--···0·root·········(0)·root·········(0)······729·2020-02-08·15:05:30.000000·./usr/share/man/man1/gthsplit.1.gz