Run of fresh-snapshots for mosdepth

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[2022-06-17 18:59:30] Opening branch at https://salsa.debian.org/med-team/mosdepth.git/,branch=master
[2022-06-17 18:59:31] Using cached branch https://janitor.debian.net/git/mosdepth/,branch=debian%2Flatest
[2022-06-17 18:59:31] Using resume branch: https://janitor.debian.net/git/mosdepth,branch=fresh-snapshots%2Fmain
[2022-06-17 18:59:35] 9% (32/355)
[2022-06-17 18:59:35]   54% (192/355)
[2022-06-17 18:59:35]   58% (206/355)
[2022-06-17 18:59:35]   81% (288/355)
[2022-06-17 18:59:35]   91% (324/355)
[2022-06-17 18:59:36] Total 384 (delta 151), reused 183 (delta 0), pack-reused 0
[2022-06-17 18:59:36] 
[2022-06-17 18:59:38] Total 25 (delta 16), reused 0 (delta 0), pack-reused 0
[2022-06-17 18:59:38] All changes applied successfully.
[2022-06-17 18:59:39] Total 0 (delta 0), reused 0 (delta 0), pack-reused 0
[2022-06-17 18:59:39] Workspace ready - starting.
[2022-06-17 18:59:39] Running ['deb-new-upstream', '--snapshot', '--refresh-patches']
Using upstream branch https://github.com/brentp/mosdepth.git (from configuration)
10)
Total 849 (delta 56), reused 104 (delta 53), pack-reused 739
last found upstream version 0.3.3 (0.3.3) is lower than previous packaged upstream version (0.3.3+git20220502.0.556a460)
Using version string 0.3.3+git20220502.1.556a460.
No upstream upstream-revision format specified, trying git:556a460
Not including upstream history, since previous upstream version (0.3.3+git20220502.0.556a460) is not present in packaging branch history.
Looking for upstream 0.3.3+git20220502.1.556a460 in upstream branch https://github.com/brentp/mosdepth.git/.
Running dist command: SCHROOT=unstable-amd64-sbuild PYTHONPATH=/:/code:/code/breezy:/code/dulwich:/code/lintian-brush:/code/ognibuild:/code/silver-platter:/code/buildlog-consultant:/code/upstream-ontologist:/code/debmutate:/code/python-debian/lib:/usr/lib/python310.zip:/usr/lib/python3.10:/usr/lib/python3.10/lib-dynload:/usr/local/lib/python3.10/dist-packages:/usr/lib/python3/dist-packages /usr/bin/python3 -m janitor.dist --packaging=/tmp/janitorxthtre3t/mosdepth/debian
Opened schroot session unstable-amd64-sbuild-a537783b-b77a-4c6e-b849-256c55775b62 (from unstable-amd64-sbuild)
apt: running ['apt', '-y', 'satisfy', 'debhelper-compat (= 13),\n               nim,\n               nim-docopt-dev,\n               nim-regex-dev,\n               nim-hts-dev (>= 0.3.14+ds-2~),\n               help2man,\n               samtools,\n               libhts-dev']
Creating directory /root in schroot session.
Using dependency resolver: [apt, cpan, ctan, pypi, npm, go, hackage, cran, bioconductor, octave-forge]
No build tools found, falling back to simple export.
/code/dulwich/dulwich/repo.py:496: UserWarning: ref refs/tags/debian/0.3.3+ds-1 points at non-present sha b42b19f79ac9f71af146ab512515cb5e42719808
  warnings.warn(
/code/dulwich/dulwich/repo.py:496: UserWarning: ref refs/tags/upstream/0.3.3+ds points at non-present sha c8902f1ad0a3dd65549e5ec0f3d9d7d505d04e1b
  warnings.warn(
debian/0.3.3+ds-1 does not point to a valid object
upstream/0.3.3+ds does not point to a valid object
Not storing pristine-tar metadata, since there is no pristine-tar branch.
All changes applied successfully.
Committing to: /tmp/janitorxthtre3t/mosdepth/
modified debian/changelog
Committed revision 51.
Merged new upstream version 0.3.3+git20220502.1.556a460 (previous: 0.3.3+git20220502.0.556a460)
Merge new upstream version 0.3.3+git20220502.1.556a460
[2022-06-17 19:00:12] Actual command: ['deb-new-upstream', '--snapshot', '--refresh-patches']
[2022-06-17 19:00:19] Opened schroot session unstable-amd64-sbuild-27913621-e52d-4a5f-821f-ccd4729388ff (from unstable-amd64-sbuild)
[2022-06-17 19:00:19] Using fixers: [PgBuildExtOutOfDateControlFixer(), SimpleBuildFixer(MissingConfigure, fix_missing_configure), SimpleBuildFixer(MissingAutomakeInput, fix_missing_automake_input), SimpleBuildFixer(MissingConfigStatusInput, fix_missing_config_status_input), SimpleBuildFixer(MissingPerlFile, fix_missing_makefile_pl), SimpleBuildFixer(DebcargoUnacceptablePredicate, debcargo_coerce_unacceptable_prerelease), SimpleBuildFixer(DebcargoUnacceptableComparator, debcargo_coerce_unacceptable_prerelease), DependencyBuildFixer(AptFetchFailure, retry_apt_failure), PackageDependencyFixer(AptResolver(<ognibuild.debian.apt.AptManager object at 0x7f1b2963b8b0>, [functools.partial(<function python_tie_breaker at 0x7f1b27828e50>, <GitWorkingTree of /tmp/janitorxthtre3t/mosdepth>, ''), BuildDependencyTieBreaker('/var/run/schroot/mount/unstable-amd64-sbuild-27913621-e52d-4a5f-821f-ccd4729388ff'), <function popcon_tie_breaker at 0x7f1b2782b7f0>]))]
[2022-06-17 19:00:19] Building debian packages, running 'sbuild -A -s -v'.
[2022-06-17 19:02:46] Built ['mosdepth_0.3.3+git20220502.1.556a460-1~jan+nus1_amd64.changes'].
[2022-06-17 19:02:46] Running lintian
[2022-06-17 19:02:57] Pushing result branch to {'git': 'https://janitor.debian.net/git', 'bzr': 'https://janitor.debian.net/bzr'}
Traceback (most recent call last):
  File "/code/janitor/worker.py", line 1080, in run_worker
    raise _push_error_to_worker_failure(e)
  File "/code/janitor/worker.py", line 1068, in run_worker
    import_branches_git(
  File "/code/janitor/worker.py", line 582, in import_branches_git
    inter.fetch_refs(get_changed_refs, lossy=False, overwrite=True)
  File "/code/breezy/breezy/git/interrepo.py", line 812, in fetch_refs
    new_refs = self.target.send_pack(
  File "/code/breezy/breezy/git/remote.py", line 967, in send_pack
    return self.controldir.send_pack(get_changed_refs, generate_pack_data)
  File "/code/breezy/breezy/git/remote.py", line 502, in send_pack
    result = self._client.send_pack(
  File "/code/dulwich/dulwich/client.py", line 2043, in send_pack
    resp, read = self._smart_request(
  File "/code/dulwich/dulwich/client.py", line 1983, in _smart_request
    resp, read = self._http_request(url, headers, data)
  File "/code/breezy/breezy/git/remote.py", line 804, in _http_request
    response = self.transport.request(
  File "/code/breezy/breezy/transport/http/urllib.py", line 1844, in request
    response = self._opener.open(request)
  File "/usr/lib/python3.10/urllib/request.py", line 519, in open
    response = self._open(req, data)
  File "/usr/lib/python3.10/urllib/request.py", line 536, in _open
    result = self._call_chain(self.handle_open, protocol, protocol +
  File "/usr/lib/python3.10/urllib/request.py", line 496, in _call_chain
    result = func(*args)
  File "/code/breezy/breezy/transport/http/urllib.py", line 821, in https_open
    return self.do_open(HTTPSConnection, request)
  File "/code/breezy/breezy/transport/http/urllib.py", line 698, in do_open
    connection._send_request(method, url,
  File "/usr/lib/python3.10/http/client.py", line 1328, in _send_request
    self.endheaders(body, encode_chunked=encode_chunked)
  File "/usr/lib/python3.10/http/client.py", line 1277, in endheaders
    self._send_output(message_body, encode_chunked=encode_chunked)
  File "/usr/lib/python3.10/http/client.py", line 1076, in _send_output
    self.send(chunk)
  File "/usr/lib/python3.10/http/client.py", line 998, in send
    self.sock.sendall(data)
  File "/code/breezy/breezy/transport/http/urllib.py", line 149, in sendall
    self.sock.sendall(s, *args)
  File "/usr/lib/python3.10/ssl.py", line 1236, in sendall
    v = self.send(byte_view[count:])
  File "/usr/lib/python3.10/ssl.py", line 1205, in send
    return self._sslobj.write(data)
ssl.SSLEOFError: EOF occurred in violation of protocol (_ssl.c:2396)

Publish Blockers

  • ☒ run was not successful
  • ☑ package has not been removed from the archive
  • ☑ command has not changed
  • ☑ review not required
  • ☑ 0 publish attempts so far.not currently attempting to back off
  • ☒ merge proposals for the package maintainer are currently being rate-limited (open: 1413, max open: 300)
  • ☒ change set 59b87fda-fea4-48ff-a80f-475354c457d1 is working

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