diff --git a/debian/changelog b/debian/changelog index 2025044..dc38317 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,15 @@ +barrnap (0.7+dfsg-2) unstable; urgency=medium + + [Afif Elghraoui] + * Bump Standards-Version. + * Use secure Vcs-Git. + * Migrate to git. + + [Sascha Steinbiss] + * Add autopkgtest. + + -- Sascha Steinbiss Fri, 11 Mar 2016 21:32:52 +0000 + barrnap (0.7+dfsg-1) unstable; urgency=low * New upstream release. diff --git a/debian/tests/control b/debian/tests/control new file mode 100644 index 0000000..49d3f07 --- /dev/null +++ b/debian/tests/control @@ -0,0 +1,3 @@ +Tests: test-example +Depends: @ +Restrictions: allow-stderr diff --git a/debian/tests/test-example b/debian/tests/test-example new file mode 100755 index 0000000..7c2a6d3 --- /dev/null +++ b/debian/tests/test-example @@ -0,0 +1,25 @@ +#!/bin/sh +# autopkgtest check: Run barrnap with test data +# Author: Sascha Steinbiss +set -e + +ORIGDIR=$(pwd) +WORKDIR=$(mktemp -d) + +trap "rm -rf $WORKDIR" 0 INT QUIT ABRT PIPE TERM +cd $WORKDIR + +barrnap --kingdom euk $ORIGDIR/examples/fungus.fna > fungus.gff3 +[ -s fungus.gff3 ] + +barrnap --kingdom bac $ORIGDIR/examples/bacteria.fna > bac.gff3 +[ -s bac.gff3 ] + +barrnap --kingdom arc $ORIGDIR/examples/archaea.fna > arc.gff3 +[ -s arc.gff3 ] + +barrnap --kingdom mito $ORIGDIR/examples/mitochondria.fna > mito.gff3 +[ -s mito.gff3 ] + +ls -Al +cat *