Commit 647d0853073bea7953b3ca3324420d8047ea12b2 - bart

grasp.sh: use show Martin Uecker 8 years ago

1 changed file(s) with 4 addition(s) and 4 deletion(s). Raw diff Collapse all Expand all

-4

scripts/grasp.sh less more

118	118	# read TWIX file
119	119	bart twixread -A $input grasp
120	120
121		export READ=$(tail -n1 grasp.hdr \| cut -f1 -d" ")
122		export COILS=$(tail -n1 grasp.hdr \| cut -f4 -d" ")
123		export PHASES=$(($(tail -n1 grasp.hdr \| cut -f2 -d" ") / $SPOKES))
	121	export READ=$(bart show -d0 grasp)
	122	export COILS=$(bart show -d3 grasp)
	123	export PHASES=$(($(bart show -d1 grasp) / $SPOKES))
124	124
125	125	export OMP_NUM_THREADS=$((MAXPROC * $MAXTHREADS))
126	126

135	135	bart fft -i -u $(bart bitmask 2) grasp grasp_hybrid
136	136	rm grasp.cfl grasp.hdr
137	137
138		SLICES=$(tail -n1 grasp_hybrid.hdr \| cut -f3 -d" ")
	138	SLICES=$(bart show -d2 grasp_hybrid)
139	139
140	140
141	141	# create trajectory with 400 spokes and 2x oversampling