Merge pull request #27 from blankclemens/blankclemens-patch-1
Fix format tag for text files
chahuistle authored 6 years ago
GitHub committed 6 years ago
| 999 | 999 | |
| 1000 | 1000 | if param.type is _InFile: |
| 1001 | 1001 | # assume it's just text unless restrictions are provided |
| 1002 | param_format = "text" | |
| 1002 | param_format = "txt" | |
| 1003 | 1003 | if param.restrictions is not None: |
| 1004 | 1004 | # join all formats of the file, take mapping from supported_file if available for an entry |
| 1005 | 1005 | if type(param.restrictions) is _FileFormat: |
| 1268 | 1268 | # and the stdout will be used as output |
| 1269 | 1269 | if len(outputs_node) == 0: |
| 1270 | 1270 | add_child_node(outputs_node, "data", |
| 1271 | OrderedDict([("name", "param_stdout"), ("format", "text"), ("label", "Output from stdout")])) | |
| 1271 | OrderedDict([("name", "param_stdout"), ("format", "txt"), ("label", "Output from stdout")])) | |
| 1272 | 1272 | |
| 1273 | 1273 | |
| 1274 | 1274 | def create_output_node(parent, param, model, supported_file_formats): |
| 1330 | 1330 | |
| 1331 | 1331 | def create_change_format_node(parent, data_formats, input_ref): |
| 1332 | 1332 | # <change_format> |
| 1333 | # <when input="secondary_structure" value="true" format="text"/> | |
| 1333 | # <when input="secondary_structure" value="true" format="txt"/> | |
| 1334 | 1334 | # </change_format> |
| 1335 | 1335 | change_format_node = add_child_node(parent, "change_format") |
| 1336 | 1336 | for data_format in data_formats: |