Codebase list king-probe / d8b145d
Replace reference files with their hashes Pranav Ballaney 3 years ago
10 changed file(s) with 14 addition(s) and 28 deletion(s). Raw diff Collapse all Expand all
1515 Files: debian/tests/data/1zni.pdb1.gz
1616 Source: https://www.rcsb.org/structure/1ZNI
1717
18 Files: debian/tests/ref/*
19 These files were produced by running the data files
20 listed above through king-probe as described in
21 run-unit-test.
1414
1515 Files: debian/tests/data/1zni.pdb1.gz
1616 Source: https://www.rcsb.org/structure/1ZNI
17
18 Files: debian/tests/ref/*
19 Copyright: 2020 Pranav Ballaney <ballaneypranav@gmail.com>
20 License: probe
21 Comment: These files were produced by running the data files
22 listed above through king-probe as described in
23 debian/tests/run-unit-test
2417
2518 License: probe
2619 This is free software and the source code is freely
0 debian/tests/data
1 debian/tests/ref
0 debian/tests/data
debian/tests/ref/6ins.dotinfo.table.gz less more
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debian/tests/ref/6ins.kin.gz less more
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debian/tests/ref/6ins.rawinfo.table.gz less more
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debian/tests/ref/6ins.surfacedots.kin.gz less more
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debian/tests/ref/6insEF.kin.gz less more
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debian/tests/ref/6ins_1zni.kin.gz less more
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1616 cd "${AUTOPKGTEST_TMP}"
1717
1818 gunzip -r *
19 ls -R
2019 cd data
21 #do_stuff_to_test_package#
20
2221 echo -e "\e[93m\e[1mTest 1\e[0m"
2322 king-probe 6ins.pdb1 >> 6ins.kin
2423 tail +2 6ins.kin > 6ins.kin.head
25 tail +2 ../ref/6ins.kin > ../ref/6ins.kin.head
26 diff 6ins.kin.head ../ref/6ins.kin.head
24 echo "2e8e38fca908f21e53f47bd3a9411219 6ins.kin.head" > checksum
25 md5sum --check checksum
2726 echo -e "\e[92m\e[1mPassed\e[0m"
2827 echo
2928
3029 echo -e "\e[93m\e[1mTest 2\e[0m"
3130 king-probe -count -self all 6ins.pdb1 > 6ins.dotinfo.table
3231 tail +2 6ins.dotinfo.table > 6ins.dotinfo.table.head
33 tail +2 ../ref/6ins.dotinfo.table > ../ref/6ins.dotinfo.table.head
34 diff 6ins.dotinfo.table.head ../ref/6ins.dotinfo.table.head
32 echo "23e6de91706f44a691ab0571ea50bcbb 6ins.dotinfo.table.head" > checksum
33 md5sum --check checksum
3534 echo -e "\e[92m\e[1mPassed\e[0m"
3635 echo
3736
3837 echo -e "\e[93m\e[1mTest 3\e[0m"
3938 king-probe -unformated -self "all" 6ins.pdb1 > 6ins.rawinfo.table
4039 tail +2 6ins.rawinfo.table > 6ins.rawinfo.table.head
41 tail +2 ../ref/6ins.rawinfo.table > ../ref/6ins.rawinfo.table.head
42 diff 6ins.rawinfo.table.head ../ref/6ins.rawinfo.table.head
40 echo "2a063119f359eb3ac5728788b372c8db 6ins.rawinfo.table.head" > checksum
41 md5sum --check checksum
4342 echo -e "\e[92m\e[1mPassed\e[0m"
4443 echo
4544
4645 echo -e "\e[93m\e[1mTest 4\e[0m"
4746 king-probe -out all 6ins.pdb1 >> 6ins.surfacedots.kin
4847 tail +2 6ins.surfacedots.kin > 6ins.surfacedots.kin.head
49 tail +2 ../ref/6ins.surfacedots.kin > ../ref/6ins.surfacedots.kin.head
50 diff 6ins.surfacedots.kin.head ../ref/6ins.surfacedots.kin.head
48 echo "bcea879aa884d7686e5213a9e9c935b4 6ins.surfacedots.kin.head" > checksum
49 md5sum --check checksum
5150 echo -e "\e[92m\e[1mPassed\e[0m"
5251 echo
5352
5453 echo -e "\e[93m\e[1mTest 5\e[0m"
5554 king-probe -both chainE chainF 6ins.pdb1 >> 6insEF.kin
5655 tail +2 6insEF.kin > 6insEF.kin.head
57 tail +2 ../ref/6insEF.kin > ../ref/6insEF.kin.head
58 diff 6insEF.kin.head ../ref/6insEF.kin.head
56 echo "29f07cd1e66b932f66db395264a6160a 6insEF.kin.head" > checksum
57 md5sum --check checksum
5958 echo -e "\e[92m\e[1mPassed\e[0m"
6059 echo
6160
6261 echo -e "\e[93m\e[1mTest 6\e[0m"
6362 king-probe -once all all 6ins.pdb1 1zni.pdb1 >> 6ins_1zni.kin
6463 tail +2 6ins_1zni.kin > 6ins_1zni.kin.head
65 tail +2 ../ref/6ins_1zni.kin > ../ref/6ins_1zni.kin.head
66 diff 6ins_1zni.kin.head ../ref/6ins_1zni.kin.head
64 echo "b14361cd9e8fe621e74174bc24042adb 6ins_1zni.kin.head" > checksum
65 md5sum --check checksum
6766 echo -e "\e[92m\e[1mPassed\e[0m"
6867 echo
69