Codebase list libbio-db-ncbihelper-perl / 2a09b14
Import upstream version 1.7.7 Debian Janitor 2 years ago
14 changed file(s) with 112 addition(s) and 105 deletion(s). Raw diff Collapse all Expand all
+3
-0
Changes less more
00 Summary of important user-visible changes for Bio-DB-NCBIHelper
11 ---------------------------------------------------------------
2
3 1.7.7 2021-06-30 08:52:57-05:00 America/Chicago
4 * Merge pull request to address taxonomic name change, which led to failing network tests (thx @MrCurtis!).
25
36 1.7.6 2019-12-07 16:11:22-06:00 America/Chicago
47 * Requires Bio::DB::WebDBSeqI v1.7.7
+3
-3
LICENSE less more
0 This software is copyright (c) 2019 by Aaron Mackey <amackey@virginia.edu>, Brian Osborne <bosborne@alum.mit.edu>, Jason Stajich <jason@bioperl.org>, Lincoln Stein <lstein@cshl.org>.
0 This software is copyright (c) 2021 by Aaron Mackey <amackey@virginia.edu>, Brian Osborne <bosborne@alum.mit.edu>, Jason Stajich <jason@bioperl.org>, Lincoln Stein <lstein@cshl.org>.
11
22 This is free software; you can redistribute it and/or modify it under
33 the same terms as the Perl 5 programming language system itself.
1111
1212 --- The GNU General Public License, Version 1, February 1989 ---
1313
14 This software is Copyright (c) 2019 by Aaron Mackey <amackey@virginia.edu>, Brian Osborne <bosborne@alum.mit.edu>, Jason Stajich <jason@bioperl.org>, Lincoln Stein <lstein@cshl.org>.
14 This software is Copyright (c) 2021 by Aaron Mackey <amackey@virginia.edu>, Brian Osborne <bosborne@alum.mit.edu>, Jason Stajich <jason@bioperl.org>, Lincoln Stein <lstein@cshl.org>.
1515
1616 This is free software, licensed under:
1717
271271
272272 --- The Artistic License 1.0 ---
273273
274 This software is Copyright (c) 2019 by Aaron Mackey <amackey@virginia.edu>, Brian Osborne <bosborne@alum.mit.edu>, Jason Stajich <jason@bioperl.org>, Lincoln Stein <lstein@cshl.org>.
274 This software is Copyright (c) 2021 by Aaron Mackey <amackey@virginia.edu>, Brian Osborne <bosborne@alum.mit.edu>, Jason Stajich <jason@bioperl.org>, Lincoln Stein <lstein@cshl.org>.
275275
276276 This is free software, licensed under:
277277
+1
-1
MANIFEST less more
0 # This file was automatically generated by Dist::Zilla::Plugin::Manifest v6.012.
0 # This file was automatically generated by Dist::Zilla::Plugin::Manifest v6.017.
11 Changes
22 LICENSE
33 MANIFEST
+48
-46
META.json less more
66 "Lincoln Stein <lstein@cshl.org>"
77 ],
88 "dynamic_config" : 0,
9 "generated_by" : "Dist::Zilla version 6.012, CPAN::Meta::Converter version 2.150010",
9 "generated_by" : "Dist::Zilla version 6.017, CPAN::Meta::Converter version 2.150010",
1010 "license" : [
1111 "perl_5"
1212 ],
8080 "web" : "https://github.com/bioperl/bio-db-ncbihelper"
8181 }
8282 },
83 "version" : "1.7.6",
83 "version" : "1.7.7",
8484 "x_Dist_Zilla" : {
8585 "perl" : {
86 "version" : "5.028001"
86 "version" : "5.033001"
8787 },
8888 "plugins" : [
8989 {
100100 }
101101 },
102102 "name" : "@BioPerl/@Filter/GatherDir",
103 "version" : "6.012"
103 "version" : "6.017"
104104 },
105105 {
106106 "class" : "Dist::Zilla::Plugin::PruneCruft",
107107 "name" : "@BioPerl/@Filter/PruneCruft",
108 "version" : "6.012"
108 "version" : "6.017"
109109 },
110110 {
111111 "class" : "Dist::Zilla::Plugin::ManifestSkip",
112112 "name" : "@BioPerl/@Filter/ManifestSkip",
113 "version" : "6.012"
113 "version" : "6.017"
114114 },
115115 {
116116 "class" : "Dist::Zilla::Plugin::MetaYAML",
117117 "name" : "@BioPerl/@Filter/MetaYAML",
118 "version" : "6.012"
118 "version" : "6.017"
119119 },
120120 {
121121 "class" : "Dist::Zilla::Plugin::License",
122122 "name" : "@BioPerl/@Filter/License",
123 "version" : "6.012"
123 "version" : "6.017"
124124 },
125125 {
126126 "class" : "Dist::Zilla::Plugin::ExtraTests",
127127 "name" : "@BioPerl/@Filter/ExtraTests",
128 "version" : "6.012"
128 "version" : "6.017"
129129 },
130130 {
131131 "class" : "Dist::Zilla::Plugin::ExecDir",
132132 "name" : "@BioPerl/@Filter/ExecDir",
133 "version" : "6.012"
133 "version" : "6.017"
134134 },
135135 {
136136 "class" : "Dist::Zilla::Plugin::ShareDir",
137137 "name" : "@BioPerl/@Filter/ShareDir",
138 "version" : "6.012"
138 "version" : "6.017"
139139 },
140140 {
141141 "class" : "Dist::Zilla::Plugin::MakeMaker",
145145 }
146146 },
147147 "name" : "@BioPerl/@Filter/MakeMaker",
148 "version" : "6.012"
148 "version" : "6.017"
149149 },
150150 {
151151 "class" : "Dist::Zilla::Plugin::Manifest",
152152 "name" : "@BioPerl/@Filter/Manifest",
153 "version" : "6.012"
153 "version" : "6.017"
154154 },
155155 {
156156 "class" : "Dist::Zilla::Plugin::TestRelease",
157157 "name" : "@BioPerl/@Filter/TestRelease",
158 "version" : "6.012"
158 "version" : "6.017"
159159 },
160160 {
161161 "class" : "Dist::Zilla::Plugin::ConfirmRelease",
162162 "name" : "@BioPerl/@Filter/ConfirmRelease",
163 "version" : "6.012"
163 "version" : "6.017"
164164 },
165165 {
166166 "class" : "Dist::Zilla::Plugin::UploadToCPAN",
167167 "name" : "@BioPerl/@Filter/UploadToCPAN",
168 "version" : "6.012"
168 "version" : "6.017"
169169 },
170170 {
171171 "class" : "Dist::Zilla::Plugin::MetaConfig",
172172 "name" : "@BioPerl/MetaConfig",
173 "version" : "6.012"
173 "version" : "6.017"
174174 },
175175 {
176176 "class" : "Dist::Zilla::Plugin::MetaJSON",
177177 "name" : "@BioPerl/MetaJSON",
178 "version" : "6.012"
178 "version" : "6.017"
179179 },
180180 {
181181 "class" : "Dist::Zilla::Plugin::PkgVersion",
182182 "name" : "@BioPerl/PkgVersion",
183 "version" : "6.012"
183 "version" : "6.017"
184184 },
185185 {
186186 "class" : "Dist::Zilla::Plugin::PodSyntaxTests",
187187 "name" : "@BioPerl/PodSyntaxTests",
188 "version" : "6.012"
188 "version" : "6.017"
189189 },
190190 {
191191 "class" : "Dist::Zilla::Plugin::Test::Compile",
218218 {
219219 "class" : "Dist::Zilla::Plugin::AutoPrereqs",
220220 "name" : "@BioPerl/AutoPrereqs",
221 "version" : "6.012"
221 "version" : "6.017"
222222 },
223223 {
224224 "class" : "Dist::Zilla::Plugin::AutoMetaResources",
228228 {
229229 "class" : "Dist::Zilla::Plugin::MetaResources",
230230 "name" : "@BioPerl/MetaResources",
231 "version" : "6.012"
231 "version" : "6.017"
232232 },
233233 {
234234 "class" : "Dist::Zilla::Plugin::Encoding",
235235 "name" : "@BioPerl/Encoding",
236 "version" : "6.012"
236 "version" : "6.017"
237237 },
238238 {
239239 "class" : "Dist::Zilla::Plugin::NextRelease",
240240 "name" : "@BioPerl/NextRelease",
241 "version" : "6.012"
241 "version" : "6.017"
242242 },
243243 {
244244 "class" : "Dist::Zilla::Plugin::Git::Check",
255255 "changelog" : "Changes"
256256 },
257257 "Dist::Zilla::Role::Git::Repo" : {
258 "git_version" : "2.20.1",
258 "git_version" : "2.28.0",
259259 "repo_root" : "."
260260 }
261261 },
262262 "name" : "@BioPerl/Git::Check",
263 "version" : "2.045"
263 "version" : "2.047"
264264 },
265265 {
266266 "class" : "Dist::Zilla::Plugin::Git::Commit",
267267 "config" : {
268268 "Dist::Zilla::Plugin::Git::Commit" : {
269269 "add_files_in" : [],
270 "commit_msg" : "v%v%n%n%c"
270 "commit_msg" : "v%V%n%n%c",
271 "signoff" : 0
271272 },
272273 "Dist::Zilla::Role::Git::DirtyFiles" : {
273274 "allow_dirty" : [
278279 "changelog" : "Changes"
279280 },
280281 "Dist::Zilla::Role::Git::Repo" : {
281 "git_version" : "2.20.1",
282 "git_version" : "2.28.0",
282283 "repo_root" : "."
283284 },
284285 "Dist::Zilla::Role::Git::StringFormatter" : {
286287 }
287288 },
288289 "name" : "@BioPerl/Git::Commit",
289 "version" : "2.045"
290 "version" : "2.047"
290291 },
291292 {
292293 "class" : "Dist::Zilla::Plugin::Git::Tag",
295296 "branch" : null,
296297 "changelog" : "Changes",
297298 "signed" : 0,
298 "tag" : "Bio-DB-NCBIHelper-v1.7.6",
299 "tag" : "Bio-DB-NCBIHelper-v1.7.7",
299300 "tag_format" : "%N-v%v",
300301 "tag_message" : "%N-v%v"
301302 },
302303 "Dist::Zilla::Role::Git::Repo" : {
303 "git_version" : "2.20.1",
304 "git_version" : "2.28.0",
304305 "repo_root" : "."
305306 },
306307 "Dist::Zilla::Role::Git::StringFormatter" : {
308309 }
309310 },
310311 "name" : "@BioPerl/Git::Tag",
311 "version" : "2.045"
312 "version" : "2.047"
312313 },
313314 {
314315 "class" : "Dist::Zilla::Plugin::Prereqs",
319320 }
320321 },
321322 "name" : "Prereqs",
322 "version" : "6.012"
323 "version" : "6.017"
323324 },
324325 {
325326 "class" : "Dist::Zilla::Plugin::FinderCode",
326327 "name" : ":InstallModules",
327 "version" : "6.012"
328 "version" : "6.017"
328329 },
329330 {
330331 "class" : "Dist::Zilla::Plugin::FinderCode",
331332 "name" : ":IncModules",
332 "version" : "6.012"
333 "version" : "6.017"
333334 },
334335 {
335336 "class" : "Dist::Zilla::Plugin::FinderCode",
336337 "name" : ":TestFiles",
337 "version" : "6.012"
338 "version" : "6.017"
338339 },
339340 {
340341 "class" : "Dist::Zilla::Plugin::FinderCode",
341342 "name" : ":ExtraTestFiles",
342 "version" : "6.012"
343 "version" : "6.017"
343344 },
344345 {
345346 "class" : "Dist::Zilla::Plugin::FinderCode",
346347 "name" : ":ExecFiles",
347 "version" : "6.012"
348 "version" : "6.017"
348349 },
349350 {
350351 "class" : "Dist::Zilla::Plugin::FinderCode",
351352 "name" : ":PerlExecFiles",
352 "version" : "6.012"
353 "version" : "6.017"
353354 },
354355 {
355356 "class" : "Dist::Zilla::Plugin::FinderCode",
356357 "name" : ":ShareFiles",
357 "version" : "6.012"
358 "version" : "6.017"
358359 },
359360 {
360361 "class" : "Dist::Zilla::Plugin::FinderCode",
361362 "name" : ":MainModule",
362 "version" : "6.012"
363 "version" : "6.017"
363364 },
364365 {
365366 "class" : "Dist::Zilla::Plugin::FinderCode",
366367 "name" : ":AllFiles",
367 "version" : "6.012"
368 "version" : "6.017"
368369 },
369370 {
370371 "class" : "Dist::Zilla::Plugin::FinderCode",
371372 "name" : ":NoFiles",
372 "version" : "6.012"
373 "version" : "6.017"
373374 }
374375 ],
375376 "zilla" : {
377378 "config" : {
378379 "is_trial" : 0
379380 },
380 "version" : "6.012"
381 "version" : "6.017"
381382 }
382383 },
383 "x_generated_by_perl" : "v5.28.1",
384 "x_serialization_backend" : "Cpanel::JSON::XS version 4.09"
384 "x_generated_by_perl" : "v5.33.1",
385 "x_serialization_backend" : "Cpanel::JSON::XS version 4.25",
386 "x_spdx_expression" : "Artistic-1.0-Perl OR GPL-1.0-or-later"
385387 }
386388
+47
-45
META.yml less more
1616 configure_requires:
1717 ExtUtils::MakeMaker: '0'
1818 dynamic_config: 0
19 generated_by: 'Dist::Zilla version 6.012, CPAN::Meta::Converter version 2.150010'
19 generated_by: 'Dist::Zilla version 6.017, CPAN::Meta::Converter version 2.150010'
2020 license: perl
2121 meta-spec:
2222 url: http://module-build.sourceforge.net/META-spec-v1.4.html
5050 bugtracker: https://github.com/bioperl/bio-db-ncbihelper/issues
5151 homepage: https://metacpan.org/release/Bio-DB-NCBIHelper
5252 repository: git://github.com/bioperl/bio-db-ncbihelper.git
53 version: 1.7.6
53 version: 1.7.7
5454 x_Dist_Zilla:
5555 perl:
56 version: '5.028001'
56 version: '5.033001'
5757 plugins:
5858 -
5959 class: Dist::Zilla::Plugin::GatherDir
6767 prune_directory: []
6868 root: .
6969 name: '@BioPerl/@Filter/GatherDir'
70 version: '6.012'
70 version: '6.017'
7171 -
7272 class: Dist::Zilla::Plugin::PruneCruft
7373 name: '@BioPerl/@Filter/PruneCruft'
74 version: '6.012'
74 version: '6.017'
7575 -
7676 class: Dist::Zilla::Plugin::ManifestSkip
7777 name: '@BioPerl/@Filter/ManifestSkip'
78 version: '6.012'
78 version: '6.017'
7979 -
8080 class: Dist::Zilla::Plugin::MetaYAML
8181 name: '@BioPerl/@Filter/MetaYAML'
82 version: '6.012'
82 version: '6.017'
8383 -
8484 class: Dist::Zilla::Plugin::License
8585 name: '@BioPerl/@Filter/License'
86 version: '6.012'
86 version: '6.017'
8787 -
8888 class: Dist::Zilla::Plugin::ExtraTests
8989 name: '@BioPerl/@Filter/ExtraTests'
90 version: '6.012'
90 version: '6.017'
9191 -
9292 class: Dist::Zilla::Plugin::ExecDir
9393 name: '@BioPerl/@Filter/ExecDir'
94 version: '6.012'
94 version: '6.017'
9595 -
9696 class: Dist::Zilla::Plugin::ShareDir
9797 name: '@BioPerl/@Filter/ShareDir'
98 version: '6.012'
98 version: '6.017'
9999 -
100100 class: Dist::Zilla::Plugin::MakeMaker
101101 config:
102102 Dist::Zilla::Role::TestRunner:
103103 default_jobs: 1
104104 name: '@BioPerl/@Filter/MakeMaker'
105 version: '6.012'
105 version: '6.017'
106106 -
107107 class: Dist::Zilla::Plugin::Manifest
108108 name: '@BioPerl/@Filter/Manifest'
109 version: '6.012'
109 version: '6.017'
110110 -
111111 class: Dist::Zilla::Plugin::TestRelease
112112 name: '@BioPerl/@Filter/TestRelease'
113 version: '6.012'
113 version: '6.017'
114114 -
115115 class: Dist::Zilla::Plugin::ConfirmRelease
116116 name: '@BioPerl/@Filter/ConfirmRelease'
117 version: '6.012'
117 version: '6.017'
118118 -
119119 class: Dist::Zilla::Plugin::UploadToCPAN
120120 name: '@BioPerl/@Filter/UploadToCPAN'
121 version: '6.012'
121 version: '6.017'
122122 -
123123 class: Dist::Zilla::Plugin::MetaConfig
124124 name: '@BioPerl/MetaConfig'
125 version: '6.012'
125 version: '6.017'
126126 -
127127 class: Dist::Zilla::Plugin::MetaJSON
128128 name: '@BioPerl/MetaJSON'
129 version: '6.012'
129 version: '6.017'
130130 -
131131 class: Dist::Zilla::Plugin::PkgVersion
132132 name: '@BioPerl/PkgVersion'
133 version: '6.012'
133 version: '6.017'
134134 -
135135 class: Dist::Zilla::Plugin::PodSyntaxTests
136136 name: '@BioPerl/PodSyntaxTests'
137 version: '6.012'
137 version: '6.017'
138138 -
139139 class: Dist::Zilla::Plugin::Test::Compile
140140 config:
160160 -
161161 class: Dist::Zilla::Plugin::AutoPrereqs
162162 name: '@BioPerl/AutoPrereqs'
163 version: '6.012'
163 version: '6.017'
164164 -
165165 class: Dist::Zilla::Plugin::AutoMetaResources
166166 name: '@BioPerl/AutoMetaResources'
168168 -
169169 class: Dist::Zilla::Plugin::MetaResources
170170 name: '@BioPerl/MetaResources'
171 version: '6.012'
171 version: '6.017'
172172 -
173173 class: Dist::Zilla::Plugin::Encoding
174174 name: '@BioPerl/Encoding'
175 version: '6.012'
175 version: '6.017'
176176 -
177177 class: Dist::Zilla::Plugin::NextRelease
178178 name: '@BioPerl/NextRelease'
179 version: '6.012'
179 version: '6.017'
180180 -
181181 class: Dist::Zilla::Plugin::Git::Check
182182 config:
189189 allow_dirty_match: []
190190 changelog: Changes
191191 Dist::Zilla::Role::Git::Repo:
192 git_version: 2.20.1
192 git_version: 2.28.0
193193 repo_root: .
194194 name: '@BioPerl/Git::Check'
195 version: '2.045'
195 version: '2.047'
196196 -
197197 class: Dist::Zilla::Plugin::Git::Commit
198198 config:
199199 Dist::Zilla::Plugin::Git::Commit:
200200 add_files_in: []
201 commit_msg: v%v%n%n%c
201 commit_msg: v%V%n%n%c
202 signoff: '0'
202203 Dist::Zilla::Role::Git::DirtyFiles:
203204 allow_dirty:
204205 - Changes
206207 allow_dirty_match: []
207208 changelog: Changes
208209 Dist::Zilla::Role::Git::Repo:
209 git_version: 2.20.1
210 git_version: 2.28.0
210211 repo_root: .
211212 Dist::Zilla::Role::Git::StringFormatter:
212213 time_zone: local
213214 name: '@BioPerl/Git::Commit'
214 version: '2.045'
215 version: '2.047'
215216 -
216217 class: Dist::Zilla::Plugin::Git::Tag
217218 config:
219220 branch: ~
220221 changelog: Changes
221222 signed: 0
222 tag: Bio-DB-NCBIHelper-v1.7.6
223 tag: Bio-DB-NCBIHelper-v1.7.7
223224 tag_format: '%N-v%v'
224225 tag_message: '%N-v%v'
225226 Dist::Zilla::Role::Git::Repo:
226 git_version: 2.20.1
227 git_version: 2.28.0
227228 repo_root: .
228229 Dist::Zilla::Role::Git::StringFormatter:
229230 time_zone: local
230231 name: '@BioPerl/Git::Tag'
231 version: '2.045'
232 version: '2.047'
232233 -
233234 class: Dist::Zilla::Plugin::Prereqs
234235 config:
236237 phase: runtime
237238 type: requires
238239 name: Prereqs
239 version: '6.012'
240 version: '6.017'
240241 -
241242 class: Dist::Zilla::Plugin::FinderCode
242243 name: ':InstallModules'
243 version: '6.012'
244 version: '6.017'
244245 -
245246 class: Dist::Zilla::Plugin::FinderCode
246247 name: ':IncModules'
247 version: '6.012'
248 version: '6.017'
248249 -
249250 class: Dist::Zilla::Plugin::FinderCode
250251 name: ':TestFiles'
251 version: '6.012'
252 version: '6.017'
252253 -
253254 class: Dist::Zilla::Plugin::FinderCode
254255 name: ':ExtraTestFiles'
255 version: '6.012'
256 version: '6.017'
256257 -
257258 class: Dist::Zilla::Plugin::FinderCode
258259 name: ':ExecFiles'
259 version: '6.012'
260 version: '6.017'
260261 -
261262 class: Dist::Zilla::Plugin::FinderCode
262263 name: ':PerlExecFiles'
263 version: '6.012'
264 version: '6.017'
264265 -
265266 class: Dist::Zilla::Plugin::FinderCode
266267 name: ':ShareFiles'
267 version: '6.012'
268 version: '6.017'
268269 -
269270 class: Dist::Zilla::Plugin::FinderCode
270271 name: ':MainModule'
271 version: '6.012'
272 version: '6.017'
272273 -
273274 class: Dist::Zilla::Plugin::FinderCode
274275 name: ':AllFiles'
275 version: '6.012'
276 version: '6.017'
276277 -
277278 class: Dist::Zilla::Plugin::FinderCode
278279 name: ':NoFiles'
279 version: '6.012'
280 version: '6.017'
280281 zilla:
281282 class: Dist::Zilla::Dist::Builder
282283 config:
283284 is_trial: '0'
284 version: '6.012'
285 x_generated_by_perl: v5.28.1
285 version: '6.017'
286 x_generated_by_perl: v5.33.1
286287 x_serialization_backend: 'YAML::Tiny version 1.73'
288 x_spdx_expression: 'Artistic-1.0-Perl OR GPL-1.0-or-later'
+2
-2
Makefile.PL less more
0 # This file was automatically generated by Dist::Zilla::Plugin::MakeMaker v6.012.
0 # This file was automatically generated by Dist::Zilla::Plugin::MakeMaker v6.017.
11 use strict;
22 use warnings;
33
5454 "Test::Most" => 0,
5555 "Test::RequiresInternet" => 0
5656 },
57 "VERSION" => "1.7.6",
57 "VERSION" => "1.7.7",
5858 "test" => {
5959 "TESTS" => "t/*.t"
6060 }
+1
-1
dist.ini less more
00 name = Bio-DB-NCBIHelper
1 version = 1.7.6
1 version = 1.7.7
22 author = Aaron Mackey <amackey@virginia.edu>
33 author = Brian Osborne <bosborne@alum.mit.edu>
44 author = Jason Stajich <jason@bioperl.org>
+1
-1
lib/Bio/DB/EntrezGene.pm less more
9292 # Let the code begin...
9393
9494 package Bio::DB::EntrezGene;
95 $Bio::DB::EntrezGene::VERSION = '1.7.6';
95 $Bio::DB::EntrezGene::VERSION = '1.7.7';
9696 use strict;
9797 use vars qw($DEFAULTFORMAT $DEFAULTMODE %PARAMSTRING);
9898
+1
-1
lib/Bio/DB/GenBank.pm less more
164164 # Let the code begin...
165165
166166 package Bio::DB::GenBank;
167 $Bio::DB::GenBank::VERSION = '1.7.6';
167 $Bio::DB::GenBank::VERSION = '1.7.7';
168168 use strict;
169169 use vars qw(%PARAMSTRING $DEFAULTFORMAT $DEFAULTMODE);
170170
+1
-1
lib/Bio/DB/GenPept.pm less more
9292 # Let the code begin...
9393
9494 package Bio::DB::GenPept;
95 $Bio::DB::GenPept::VERSION = '1.7.6';
95 $Bio::DB::GenPept::VERSION = '1.7.7';
9696 use strict;
9797 use vars qw($DEFAULTFORMAT $DEFAULTMODE %PARAMSTRING);
9898
+1
-1
lib/Bio/DB/NCBIHelper.pm less more
8484 # Let the code begin...
8585
8686 package Bio::DB::NCBIHelper;
87 $Bio::DB::NCBIHelper::VERSION = '1.7.6';
87 $Bio::DB::NCBIHelper::VERSION = '1.7.7';
8888 use strict;
8989
9090 use Bio::DB::Query::GenBank;
+1
-1
lib/Bio/DB/Query/GenBank.pm less more
9595 # Let the code begin...
9696
9797 package Bio::DB::Query::GenBank;
98 $Bio::DB::Query::GenBank::VERSION = '1.7.6';
98 $Bio::DB::Query::GenBank::VERSION = '1.7.7';
9999 use strict;
100100 use URI::Escape 'uri_unescape';
101101 use Bio::DB::NCBIHelper;
+1
-1
lib/Bio/DB/Taxonomy/entrez.pm less more
100100 # Let the code begin...
101101
102102 package Bio::DB::Taxonomy::entrez;
103 $Bio::DB::Taxonomy::entrez::VERSION = '1.7.6';
103 $Bio::DB::Taxonomy::entrez::VERSION = '1.7.7';
104104 use vars qw($EntrezLocation $UrlParamSeparatorValue %EntrezParams
105105 $EntrezGet $EntrezSummary $EntrezFetch %SequenceParams
106106 $XMLTWIG $DATA_CACHE $RELATIONS);
+1
-1
t/Taxonomy.t less more
9898 sleep(3);
9999
100100 ok $n = $db->get_Taxonomy_Node('1760');
101 is $n->scientific_name, 'Actinobacteria';
101 is $n->scientific_name, 'Actinomycetia';
102102
103103 sleep(3);
104104