Codebase list ohcount / d4c3f612-6685-4dc0-9339-5433a0a275c0/main test / expected_dir / mathematica1.m
d4c3f612-6685-4dc0-9339-5433a0a275c0/main

Tree @d4c3f612-6685-4dc0-9339-5433a0a275c0/main (Download .tar.gz)

mathematica1.m @d4c3f612-6685-4dc0-9339-5433a0a275c0/mainraw · history · blame

   1
   2
   3
   4
   5
   6
   7
   8
   9
  10
  11
  12
  13
  14
  15
  16
  17
  18
  19
  20
  21
  22
  23
  24
  25
  26
  27
  28
  29
  30
  31
  32
  33
  34
  35
  36
  37
  38
  39
  40
  41
  42
  43
  44
  45
  46
  47
  48
  49
  50
  51
  52
  53
  54
  55
  56
  57
  58
  59
  60
  61
  62
  63
  64
  65
  66
  67
  68
  69
  70
  71
  72
  73
  74
  75
  76
  77
  78
  79
  80
  81
  82
  83
  84
  85
  86
  87
  88
  89
  90
  91
  92
  93
  94
  95
  96
  97
  98
  99
 100
 101
 102
 103
 104
 105
 106
 107
 108
 109
 110
 111
 112
 113
 114
 115
 116
 117
 118
 119
 120
 121
 122
 123
 124
 125
 126
 127
 128
 129
 130
 131
 132
 133
 134
 135
 136
 137
 138
 139
 140
 141
 142
 143
 144
 145
 146
 147
 148
 149
 150
 151
 152
 153
 154
 155
 156
 157
 158
 159
 160
 161
 162
 163
 164
 165
 166
 167
 168
 169
 170
 171
 172
 173
 174
 175
 176
 177
 178
 179
 180
 181
 182
 183
 184
 185
 186
 187
 188
 189
 190
 191
 192
 193
 194
 195
 196
 197
 198
 199
 200
 201
 202
 203
 204
 205
 206
 207
 208
 209
 210
 211
 212
 213
 214
 215
 216
 217
 218
 219
 220
 221
 222
 223
 224
 225
 226
 227
 228
 229
 230
 231
 232
 233
 234
 235
 236
 237
 238
 239
 240
 241
 242
 243
 244
 245
 246
 247
 248
 249
 250
 251
 252
 253
 254
 255
 256
 257
 258
 259
 260
 261
 262
 263
 264
 265
 266
 267
 268
 269
 270
 271
 272
 273
 274
 275
 276
 277
 278
 279
 280
 281
 282
 283
 284
 285
 286
 287
 288
 289
 290
 291
 292
 293
 294
 295
 296
 297
 298
 299
 300
 301
 302
 303
 304
 305
 306
 307
 308
 309
 310
 311
 312
 313
 314
 315
 316
 317
 318
 319
 320
 321
 322
 323
 324
 325
 326
 327
 328
 329
 330
 331
 332
 333
 334
 335
 336
 337
 338
 339
 340
 341
 342
 343
 344
 345
 346
 347
 348
 349
 350
 351
 352
 353
 354
 355
 356
 357
 358
 359
 360
 361
 362
 363
 364
 365
 366
 367
 368
 369
 370
 371
 372
 373
 374
 375
 376
 377
 378
 379
 380
 381
 382
 383
 384
 385
 386
 387
 388
 389
 390
 391
 392
 393
 394
 395
 396
 397
 398
 399
 400
 401
 402
 403
 404
 405
 406
 407
 408
 409
 410
 411
 412
 413
 414
 415
 416
 417
 418
 419
 420
 421
 422
 423
 424
 425
 426
 427
 428
 429
 430
 431
 432
 433
 434
 435
 436
 437
 438
 439
 440
 441
 442
 443
 444
 445
 446
 447
 448
 449
 450
 451
 452
 453
 454
 455
 456
 457
 458
 459
 460
 461
 462
 463
 464
 465
 466
 467
 468
 469
 470
 471
 472
 473
 474
 475
 476
 477
 478
 479
 480
 481
 482
 483
 484
 485
 486
 487
 488
 489
 490
 491
 492
 493
 494
 495
 496
 497
 498
 499
 500
 501
 502
 503
 504
 505
 506
 507
 508
 509
 510
 511
 512
 513
 514
 515
 516
 517
 518
 519
 520
 521
 522
 523
 524
 525
 526
 527
 528
 529
 530
 531
 532
 533
 534
 535
 536
 537
 538
 539
 540
 541
 542
 543
 544
 545
 546
 547
 548
 549
 550
 551
 552
 553
 554
 555
 556
 557
 558
 559
 560
 561
 562
 563
 564
 565
 566
 567
 568
 569
 570
 571
 572
 573
 574
 575
 576
 577
 578
 579
 580
 581
 582
 583
 584
 585
 586
 587
 588
 589
 590
 591
 592
 593
 594
 595
 596
 597
 598
 599
 600
 601
 602
 603
 604
 605
 606
 607
 608
 609
 610
 611
 612
 613
 614
 615
 616
 617
 618
 619
 620
 621
 622
 623
 624
 625
 626
 627
 628
 629
 630
 631
 632
 633
 634
 635
 636
 637
 638
 639
 640
 641
 642
 643
 644
 645
 646
 647
 648
 649
 650
 651
 652
 653
 654
 655
 656
 657
 658
 659
 660
 661
 662
 663
 664
 665
 666
 667
 668
 669
 670
 671
 672
 673
 674
 675
 676
 677
 678
 679
 680
 681
 682
 683
 684
 685
 686
 687
 688
 689
 690
 691
 692
 693
 694
 695
 696
 697
 698
 699
 700
 701
 702
 703
 704
 705
 706
 707
 708
 709
 710
 711
 712
 713
 714
 715
 716
 717
 718
 719
 720
 721
 722
 723
 724
 725
 726
 727
 728
 729
 730
 731
 732
 733
 734
 735
 736
 737
 738
 739
 740
 741
 742
 743
 744
 745
 746
 747
 748
 749
 750
 751
 752
 753
 754
 755
 756
 757
 758
 759
 760
 761
 762
 763
 764
 765
 766
 767
 768
 769
 770
 771
 772
 773
 774
 775
 776
 777
 778
 779
 780
 781
 782
 783
 784
 785
 786
 787
 788
 789
 790
 791
 792
 793
 794
 795
 796
 797
 798
 799
 800
 801
 802
 803
 804
 805
 806
 807
 808
 809
 810
 811
 812
 813
 814
 815
 816
 817
 818
 819
 820
 821
 822
 823
 824
 825
 826
 827
 828
 829
 830
 831
 832
 833
 834
 835
 836
 837
 838
 839
 840
 841
 842
 843
 844
 845
 846
 847
 848
 849
 850
 851
 852
 853
 854
 855
 856
 857
 858
 859
 860
 861
 862
 863
 864
 865
 866
 867
 868
 869
 870
 871
 872
 873
 874
 875
 876
 877
 878
 879
 880
 881
 882
 883
 884
 885
 886
 887
 888
 889
 890
 891
 892
 893
 894
 895
 896
 897
 898
 899
 900
 901
 902
 903
 904
 905
 906
 907
 908
 909
 910
 911
 912
 913
 914
 915
 916
 917
 918
 919
 920
 921
 922
 923
 924
 925
 926
 927
 928
 929
 930
 931
 932
 933
 934
 935
 936
 937
 938
 939
 940
 941
 942
 943
 944
 945
 946
 947
 948
 949
 950
 951
 952
 953
 954
 955
 956
 957
 958
 959
 960
 961
 962
 963
 964
 965
 966
 967
 968
 969
 970
 971
 972
 973
 974
 975
 976
 977
 978
 979
 980
 981
 982
 983
 984
 985
 986
 987
 988
 989
 990
 991
 992
 993
 994
 995
 996
 997
 998
 999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
1189
1190
1191
1192
1193
1194
1195
1196
1197
1198
1199
1200
1201
1202
1203
1204
1205
1206
1207
1208
1209
1210
1211
1212
1213
1214
1215
1216
1217
1218
1219
1220
1221
1222
1223
1224
1225
1226
1227
1228
1229
1230
1231
1232
1233
1234
1235
1236
1237
1238
1239
1240
1241
1242
1243
1244
1245
1246
1247
1248
1249
1250
1251
1252
1253
1254
1255
1256
1257
1258
1259
1260
1261
1262
1263
1264
1265
1266
1267
1268
1269
1270
1271
1272
1273
1274
1275
1276
1277
1278
1279
1280
1281
1282
1283
1284
1285
1286
1287
1288
1289
1290
1291
1292
1293
1294
1295
1296
1297
1298
1299
1300
1301
1302
1303
1304
1305
1306
1307
1308
1309
1310
1311
1312
1313
1314
1315
1316
1317
1318
1319
1320
1321
1322
1323
1324
1325
1326
1327
1328
1329
1330
1331
1332
1333
1334
1335
1336
1337
1338
1339
1340
1341
1342
1343
1344
1345
1346
1347
1348
1349
1350
1351
1352
1353
1354
1355
1356
1357
1358
1359
1360
1361
1362
1363
1364
1365
1366
1367
1368
1369
1370
1371
1372
1373
1374
1375
1376
1377
1378
1379
1380
1381
1382
1383
1384
1385
1386
1387
1388
1389
1390
1391
1392
1393
1394
1395
1396
1397
1398
1399
1400
1401
1402
1403
1404
1405
1406
1407
1408
1409
1410
1411
1412
1413
1414
1415
1416
1417
1418
1419
1420
1421
1422
1423
1424
1425
1426
1427
1428
1429
1430
1431
1432
1433
1434
1435
1436
1437
1438
1439
1440
1441
1442
1443
1444
1445
1446
1447
1448
1449
1450
1451
1452
1453
1454
1455
1456
1457
1458
1459
1460
1461
1462
1463
1464
1465
1466
1467
1468
1469
1470
1471
1472
1473
1474
1475
1476
1477
1478
1479
1480
mathematica	blank	
mathematica	code	SetEnhancedTimes[False];
mathematica	code	SetSourceLanguage["C"];
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Options *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	createCode[derivOrder_, useJacobian_, splitUpwindDerivs_, useVectors_, useOpenCL_, evolutionTimelevels_, addMatter_, formulation_] :=
mathematica	code	Module[{prefix, suffix, thorn},
mathematica	blank	
mathematica	code	prefix = "ML_";
mathematica	code	suffix =
mathematica	code	  ""
mathematica	code	  <> If [useJacobian, "_MP", ""]
mathematica	code	  <> If [derivOrder!=4, "_O" <> ToString[derivOrder], ""]
mathematica	code	  <> If [splitUpwindDerivs, "", "_UPW"]
mathematica	code	  <> If [useVectors, "", "_NV"]
mathematica	code	  <> If [useOpenCL, "_CL", ""]
mathematica	comment	  (* <> If [evolutionTimelevels!=3, "_TL" <> ToString[evolutionTimelevels], ""] *)
mathematica	comment	  (* <> If [addMatter==1, "_M", ""] *)
mathematica	code	  ;
mathematica	blank	
mathematica	code	thorn = prefix <> formulation <> suffix;
mathematica	blank	
mathematica	code	SetAttributes[IfCCZ4, HoldAll];
mathematica	code	IfCCZ4[expr_, else_:Sequence[]] := If[formulation === "CCZ4", expr, Unevaluated[else]];
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Derivatives *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	KD = KroneckerDelta;
mathematica	blank	
mathematica	code	derivatives =
mathematica	code	{
mathematica	code	  PDstandardNth[i_]    -> StandardCenteredDifferenceOperator[1,fdOrder/2,i],
mathematica	code	  PDstandardNth[i_,i_] -> StandardCenteredDifferenceOperator[2,fdOrder/2,i],
mathematica	code	  PDstandardNth[i_,j_] -> StandardCenteredDifferenceOperator[1,fdOrder/2,i] *
mathematica	code	                          StandardCenteredDifferenceOperator[1,fdOrder/2,j],
mathematica	code	  PDdissipationNth[i_] ->
mathematica	code	    (-1)^(fdOrder/2) *
mathematica	code	    spacing[i]^(fdOrder+1) / 2^(fdOrder+2) *
mathematica	code	    StandardCenteredDifferenceOperator[fdOrder+2,fdOrder/2+1,i],
mathematica	blank	
mathematica	comment	(* PD: These come from my mathematica notebook
mathematica	comment	   "Upwind-Kranc-Convert.nb" that converts upwinding finite
mathematica	comment	   differencing operators generated by
mathematica	comment	   StandardUpwindDifferenceOperator into this form *)
mathematica	blank	
mathematica	code	  Sequence@@Flatten[Table[
mathematica	code	   {PDupwindNth[i] -> Switch[fdOrder,
mathematica	code	      2, (dir[i]*(-3 + 4*shift[i]^dir[i] - shift[i]^(2*dir[i])))/(2*spacing[i]),
mathematica	code	      4, (dir[i]*(-10 - 3/shift[i]^dir[i] + 18*shift[i]^dir[i] -
mathematica	code	          6*shift[i]^(2*dir[i]) + shift[i]^(3*dir[i])))/(12*spacing[i]),
mathematica	code	      6, (dir[i]*(-35 + 2/shift[i]^(2*dir[i]) - 24/shift[i]^dir[i] + 80*shift[i]^dir[i] -
mathematica	code	          30*shift[i]^(2*dir[i]) + 8*shift[i]^(3*dir[i]) - shift[i]^(4*dir[i])))/(60*spacing[i]),
mathematica	code	      8, (dir[i]*(-378 - 5/shift[i]^(3*dir[i]) + 60/shift[i]^(2*dir[i]) - 420/shift[i]^dir[i] +
mathematica	code	          1050*shift[i]^dir[i] - 420*shift[i]^(2*dir[i]) + 140*shift[i]^(3*dir[i]) - 30*shift[i]^(4*dir[i]) +
mathematica	code	          3*shift[i]^(5*dir[i])))/(840*spacing[i])],
mathematica	blank	
mathematica	code	    PDupwindNthAnti[i] -> Switch[fdOrder,
mathematica	code	      2, (+1 shift[i]^(-2) -4 shift[i]^(-1) +0 shift[i]^( 0) +4 shift[i]^(+1) -1 shift[i]^(+2)) / (4 spacing[i]),
mathematica	code	      4, (-1 shift[i]^(-3) +6 shift[i]^(-2) -21 shift[i]^(-1 )+0 shift[i]^( 0) +21 shift[i]^(+1)
mathematica	code	          -6 shift[i]^(+2) +1 shift[i]^(+3)) / (24 spacing[i]),
mathematica	code	      6, (+1 shift[i]^(-4) -8 shift[i]^(-3) +32 shift[i]^(-2) -104 shift[i]^(-1) +0 shift[i]^( 0)
mathematica	code	          +104 shift[i]^(+1) -32 shift[i]^(+2) +8 shift[i]^(+3) -1 shift[i]^(+4)) / (120 spacing[i]),
mathematica	code	      8, (-3 shift[i]^(-5) +30 shift[i]^(-4) -145 shift[i]^(-3) +480 shift[i]^(-2) -1470 shift[i]^(-1)
mathematica	code	          +0 shift[i]^( 0) +1470 shift[i]^(+1) -480 shift[i]^(+2) +145 shift[i]^(+3) -30 shift[i]^(+4)
mathematica	code	          +3 shift[i]^(+5)) / (1680 spacing[i])],
mathematica	blank	
mathematica	code	    PDupwindNthSymm[i] -> Switch[fdOrder,
mathematica	code	     2, (-1 shift[i]^(-2) +4 shift[i]^(-1) -6 shift[i]^( 0) +4 shift[i]^(+1) -1 shift[i]^(+2)) / (4 spacing[i]),
mathematica	code	     4, (+1 shift[i]^(-3) -6 shift[i]^(-2) +15 shift[i]^(-1) -20 shift[i]^( 0) +15 shift[i]^(+1)
mathematica	code	         -6 shift[i]^(+2) +1 shift[i]^(+3)) / (24 spacing[i]),
mathematica	code	     6, (-1 shift[i]^(-4) +8 shift[i]^(-3) - 28 shift[i]^(-2)+56 shift[i]^(-1)-70 shift[i]^( 0)
mathematica	code	         +56 shift[i]^(+1) -28 shift[i]^(+2) +8 shift[i]^(+3) -1 shift[i]^(+4)) / (120 spacing[i]),
mathematica	code	     8, (+3 shift[i]^(-5) -30 shift[i]^(-4) +135 shift[i]^(-3) -360 shift[i]^(-2) +630 shift[i]^(-1)
mathematica	code	         -756 shift[i]^( 0) +630 shift[i]^(+1) -360 shift[i]^(+2) +135 shift[i]^(+3) -30 shift[i]^(+4)
mathematica	code	         +3 shift[i]^(+5)) / (1680 spacing[i])],
mathematica	blank	
mathematica	comment	    (* TODO: make these higher order stencils *)
mathematica	code	    PDonesided[i] -> dir[i] (-1 + shift[i]^dir[i]) / spacing[i]} /. i->j, {j,1,3}],1]
mathematica	code	};
mathematica	blank	
mathematica	code	PD     = PDstandardNth;
mathematica	code	PDu    = PDupwindNth;
mathematica	code	PDua   = PDupwindNthAnti;
mathematica	code	PDus   = PDupwindNthSymm;
mathematica	comment	(* PDo    = PDonesided; *)
mathematica	code	PDdiss = PDdissipationNth;
mathematica	blank	
mathematica	code	If [splitUpwindDerivs,
mathematica	code	    Upwind[dir_, var_, idx_] := dir PDua[var,idx] + Abs[dir] PDus[var,idx],
mathematica	code	    Upwind[dir_, var_, idx_] := dir PDu[var,idx]];
mathematica	blank	
mathematica	blank	
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Tensors *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	comment	(* Register the tensor quantities with the TensorTools package *)
mathematica	code	Map [DefineTensor,
mathematica	code	     {normal, tangentA, tangentB, dir,
mathematica	code	      nn, nu, nlen, nlen2, su, vg,
mathematica	code	      xx, rr, th, ph,
mathematica	code	      admg, admK, admalpha, admdtalpha, admbeta, admdtbeta, H, M,
mathematica	code	      g, detg, gu, G, R, trR, Km, trK, cdphi, cdphi2,
mathematica	code	      phi, gt, At, Xt, Xtn, Theta, Z,
mathematica	code	      alpha, A, beta, B, Atm, Atu, trA, Ats, trAts,
mathematica	code	      dottrK, dotXt,
mathematica	code	      cXt, cS, cA,
mathematica	code	      e4phi, em4phi, ddetg, detgt, gtu, ddetgt, dgtu, ddgtu, Gtl, Gtlu, Gt,
mathematica	code	      Rt, Rphi, gK,
mathematica	code	      T00, T0, T, rho, S,
mathematica	code	      x, y, z, r,
mathematica	code	      epsdiss}];
mathematica	blank	
mathematica	comment	(* NOTE: It seems as if Lie[.,.] did not take these tensor weights
mathematica	comment	   into account.  Presumably, CD[.,.] and CDt[.,.] don't do this either.  *)
mathematica	code	SetTensorAttribute[phi, TensorWeight, +1/6];
mathematica	code	SetTensorAttribute[gt,  TensorWeight, -2/3];
mathematica	code	SetTensorAttribute[Xt,  TensorWeight, +2/3];
mathematica	code	SetTensorAttribute[At,  TensorWeight, -2/3];
mathematica	code	SetTensorAttribute[cXt, TensorWeight, +2/3];
mathematica	code	SetTensorAttribute[cS,  TensorWeight, +2  ];
mathematica	blank	
mathematica	code	Map [AssertSymmetricIncreasing,
mathematica	code	     {admg[la,lb], admK[la,lb], g[la,lb], K[la,lb], R[la,lb], cdphi2[la,lb],
mathematica	code	      gt[la,lb], At[la,lb], Ats[la,lb], Rt[la,lb], Rphi[la,lb], T[la,lb]}];
mathematica	code	AssertSymmetricIncreasing [G[ua,lb,lc], lb, lc];
mathematica	code	AssertSymmetricIncreasing [Gtl[la,lb,lc], lb, lc];
mathematica	code	AssertSymmetricIncreasing [Gt[ua,lb,lc], lb, lc];
mathematica	code	AssertSymmetricIncreasing [gK[la,lb,lc], la, lb];
mathematica	code	Map [AssertSymmetricIncreasing,
mathematica	code	     {gu[ua,ub], gtu[ua,ub], Atu[ua,ub]}];
mathematica	code	AssertSymmetricIncreasing [dgtu[ua,ub,lc], ua, ub];
mathematica	code	AssertSymmetricIncreasing [ddgtu[ua,ub,lc,ld], ua, ub];
mathematica	code	AssertSymmetricIncreasing [ddgtu[ua,ub,lc,ld], lc, ld];
mathematica	blank	
mathematica	code	DefineConnection [CD, PD, G];
mathematica	code	DefineConnection [CDt, PD, Gt];
mathematica	blank	
mathematica	comment	(* Use the CartGrid3D variable names *)
mathematica	code	x1=x; x2=y; x3=z;
mathematica	blank	
mathematica	comment	(* Use the ADMBase variable names *)
mathematica	code	admg11=gxx; admg12=gxy; admg22=gyy; admg13=gxz; admg23=gyz; admg33=gzz;
mathematica	code	admK11=kxx; admK12=kxy; admK22=kyy; admK13=kxz; admK23=kyz; admK33=kzz;
mathematica	code	admalpha=alp;
mathematica	code	admdtalpha=dtalp;
mathematica	code	admbeta1=betax; admbeta2=betay; admbeta3=betaz;
mathematica	code	admdtbeta1=dtbetax; admdtbeta2=dtbetay; admdtbeta3=dtbetaz;
mathematica	blank	
mathematica	comment	(* Use the TmunuBase variable names *)
mathematica	code	T00=eTtt;
mathematica	code	T01=eTtx; T02=eTty; T03=eTtz;
mathematica	code	T11=eTxx; T12=eTxy; T22=eTyy; T13=eTxz; T23=eTyz; T33=eTzz;
mathematica	blank	
mathematica	blank	
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Expressions *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	comment	(* enum constants for conformalMethod; these must be consistent
mathematica	comment	   with the definition of the Cactus parameter conformalMethod *)
mathematica	code	CMphi = 0;
mathematica	code	CMW   = 1;
mathematica	blank	
mathematica	code	detgExpr  = Det [MatrixOfComponents [g [la,lb]]];
mathematica	code	ddetgExpr[la_] =
mathematica	code	  Sum [D[Det[MatrixOfComponents[g[la, lb]]], X] PD[X, la],
mathematica	code	       {X, Union[Flatten[MatrixOfComponents[g[la, lb]]]]}];
mathematica	blank	
mathematica	code	detgtExpr = Det [MatrixOfComponents [gt[la,lb]]];
mathematica	code	ddetgtExpr[la_] =
mathematica	code	  Sum [D[Det[MatrixOfComponents[gt[la, lb]]], X] PD[X, la],
mathematica	code	       {X, Union[Flatten[MatrixOfComponents[gt[la, lb]]]]}];
mathematica	blank	
mathematica	code	etaExpr = SpatialBetaDriverRadius / Max [r, SpatialBetaDriverRadius];
mathematica	code	thetaExpr = Min [Exp [1 - r / SpatialShiftGammaCoeffRadius], 1];
mathematica	blank	
mathematica	blank	
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Groups *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	evolvedGroups =
mathematica	code	  {SetGroupName [CreateGroupFromTensor [phi      ], prefix <> "log_confac"],
mathematica	code	   SetGroupName [CreateGroupFromTensor [gt[la,lb]], prefix <> "metric"    ],
mathematica	code	   SetGroupName [CreateGroupFromTensor [Xt[ua]   ], prefix <> "Gamma"     ],
mathematica	code	   SetGroupName [CreateGroupFromTensor [trK      ], prefix <> "trace_curv"],
mathematica	code	   SetGroupName [CreateGroupFromTensor [At[la,lb]], prefix <> "curv"      ],
mathematica	code	   SetGroupName [CreateGroupFromTensor [alpha    ], prefix <> "lapse"     ],
mathematica	code	   SetGroupName [CreateGroupFromTensor [A        ], prefix <> "dtlapse"   ],
mathematica	code	   SetGroupName [CreateGroupFromTensor [beta[ua] ], prefix <> "shift"     ],
mathematica	code	   SetGroupName [CreateGroupFromTensor [B[ua]    ], prefix <> "dtshift"   ],
mathematica	code	   IfCCZ4[SetGroupName[CreateGroupFromTensor[Theta], prefix <> "Theta"]]};
mathematica	code	evaluatedGroups =
mathematica	code	  {SetGroupName [CreateGroupFromTensor [H      ], prefix <> "Ham"],
mathematica	code	   SetGroupName [CreateGroupFromTensor [M[la]  ], prefix <> "mom"],
mathematica	code	   SetGroupName [CreateGroupFromTensor [cS     ], prefix <> "cons_detg"],
mathematica	code	   SetGroupName [CreateGroupFromTensor [cXt[ua]], prefix <> "cons_Gamma"],
mathematica	code	   SetGroupName [CreateGroupFromTensor [cA     ], prefix <> "cons_traceA"]};
mathematica	blank	
mathematica	code	declaredGroups = Join [evolvedGroups, evaluatedGroups];
mathematica	code	declaredGroupNames = Map [First, declaredGroups];
mathematica	blank	
mathematica	blank	
mathematica	blank	
mathematica	code	extraGroups =
mathematica	code	  {{"grid::coordinates", {x, y, z, r}},
mathematica	code	   {"ADMBase::metric",  {gxx, gxy, gxz, gyy, gyz, gzz}},
mathematica	code	   {"ADMBase::curv",    {kxx, kxy, kxz, kyy, kyz, kzz}},
mathematica	code	   {"ADMBase::lapse",   {alp}},
mathematica	code	   {"ADMBase::dtlapse", {dtalp}},
mathematica	code	   {"ADMBase::shift",   {betax, betay, betaz}},
mathematica	code	   {"ADMBase::dtshift", {dtbetax, dtbetay, dtbetaz}},
mathematica	code	   {"TmunuBase::stress_energy_scalar", {eTtt}},
mathematica	code	   {"TmunuBase::stress_energy_vector", {eTtx, eTty, eTtz}},
mathematica	code	   {"TmunuBase::stress_energy_tensor", {eTxx, eTxy, eTxz, eTyy, eTyz, eTzz}}
mathematica	code	};
mathematica	blank	
mathematica	code	groups = Join [declaredGroups, extraGroups];
mathematica	blank	
mathematica	blank	
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Initial data *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	initialCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_Minkowski",
mathematica	code	  Schedule -> {"IN ADMBase_InitialData"},
mathematica	code	  ConditionalOnKeyword -> {"my_initial_data", "Minkowski"},
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    phi       -> IfThen[conformalMethod==CMW, 1, 0],
mathematica	code	    gt[la,lb] -> KD[la,lb],
mathematica	code	    trK       -> 0,
mathematica	code	    At[la,lb] -> 0,
mathematica	code	    Xt[ua]    -> 0,
mathematica	code	    alpha     -> 1,
mathematica	code	    A         -> 0,
mathematica	code	    beta[ua]  -> 0,
mathematica	code	    B[ua]     -> 0,
mathematica	code	    IfCCZ4[Theta -> 0]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	blank	
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Split a calculation *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	PartialCalculation[calc_, suffix_, updates_, evolVars_] :=
mathematica	code	Module[
mathematica	code	  {name, calc1, replaces, calc2, vars, patterns, eqs, calc3},
mathematica	comment	  (* Add suffix to name *)
mathematica	code	  name     = lookup[calc, Name] <> suffix;
mathematica	code	  calc1    = mapReplace[calc, Name, name];
mathematica	comment	  (* Replace some entries in the calculation *)
mathematica	comment	  (* replaces = Map[Function[rule, mapReplace[#, rule[[1]], rule[[2]]]&], updates]; *)
mathematica	code	  replaces = updates //. (lhs_ -> rhs_) -> (mapReplace[#, lhs, rhs]&);
mathematica	code	  calc2 = Apply[Composition, replaces][calc1];
mathematica	comment	  (* Remove unnecessary equations *)
mathematica	code	  vars     = Join[evolVars, lookup[calc2, Shorthands]];
mathematica	code	  patterns = Replace[vars, {    Tensor[n_,__]  ->     Tensor[n,__] ,
mathematica	code	                            dot[Tensor[n_,__]] -> dot[Tensor[n,__]]}, 1];
mathematica	code	  eqs      = FilterRules[lookup[calc, Equations], patterns];
mathematica	code	  calc3    = mapReplace[calc2, Equations, eqs];
mathematica	code	  calc3
mathematica	code	];
mathematica	blank	
mathematica	blank	
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Convert from ADMBase *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	convertFromADMBaseCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_convertFromADMBase",
mathematica	code	  Schedule -> {"AT initial AFTER ADMBase_PostInitial"},
mathematica	code	  ConditionalOnKeyword -> {"my_initial_data", "ADMBase"},
mathematica	code	  Shorthands -> {g[la,lb], detg, gu[ua,ub], em4phi},
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    g[la,lb]  -> admg[la,lb],
mathematica	code	    detg      -> detgExpr,
mathematica	code	    gu[ua,ub] -> 1/detg detgExpr MatrixInverse [g[ua,ub]],
mathematica	blank	
mathematica	code	    phi       -> IfThen[conformalMethod==CMW, detg^(-1/6), Log[detg]/12],
mathematica	code	    em4phi    -> IfThen[conformalMethod==CMW, phi^2, Exp[-4 phi]],
mathematica	code	    gt[la,lb] -> em4phi g[la,lb],
mathematica	blank	
mathematica	code	    trK       -> gu[ua,ub] admK[la,lb],
mathematica	code	    At[la,lb] -> em4phi (admK[la,lb] - (1/3) g[la,lb] trK),
mathematica	blank	
mathematica	code	    alpha     -> admalpha,
mathematica	blank	
mathematica	code	    beta[ua]  -> admbeta[ua],
mathematica	blank	
mathematica	code	    IfCCZ4[Theta -> 0]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	convertFromADMBaseGammaCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_convertFromADMBaseGamma",
mathematica	code	  Schedule -> {"AT initial AFTER " <> thorn <> "_convertFromADMBase"},
mathematica	code	  ConditionalOnKeyword -> {"my_initial_data", "ADMBase"},
mathematica	comment	  (*
mathematica	comment	  Where -> InteriorNoSync,
mathematica	comment	  *)
mathematica	comment	  (* Do not synchronise right after this routine; instead, synchronise
mathematica	comment	     after extrapolating *)
mathematica	code	  Where -> Interior,
mathematica	comment	  (* Synchronise after this routine, so that the refinement boundaries
mathematica	comment	     are set correctly before extrapolating.  (We will need to
mathematica	comment	     synchronise again after extrapolating because extrapolation does
mathematica	comment	     not fill ghost zones, but this is irrelevant here.)  *)
mathematica	code	  Shorthands -> {dir[ua],
mathematica	code	                 detgt, gtu[ua,ub], Gt[ua,lb,lc], theta},
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    dir[ua] -> Sign[beta[ua]],
mathematica	blank	
mathematica	code	    detgt        -> 1 (* detgtExpr *),
mathematica	code	    gtu[ua,ub]   -> 1/detgt detgtExpr MatrixInverse [gt[ua,ub]],
mathematica	code	    Gt[ua,lb,lc] -> 1/2 gtu[ua,ud]
mathematica	code	                    (PD[gt[lb,ld],lc] + PD[gt[lc,ld],lb] - PD[gt[lb,lc],ld]),
mathematica	code	    Xt[ua] -> gtu[ub,uc] Gt[ua,lb,lc],
mathematica	blank	
mathematica	comment	(*
mathematica	comment	    A -> - admdtalpha / (harmonicF alpha^harmonicN) (LapseAdvectionCoeff - 1),
mathematica	comment	*)
mathematica	comment	    (* If LapseACoeff=0, then A is not evolved, in the sense that it
mathematica	comment	       does not influence the time evolution of other variables.  *)
mathematica	code	    A -> IfThen [LapseACoeff != 0,
mathematica	code	                 1 / (- harmonicF alpha^harmonicN)
mathematica	code	                 (+ admdtalpha
mathematica	code	                  - LapseAdvectionCoeff Upwind[beta[ua], alpha, la]),
mathematica	code	                 0],
mathematica	blank	
mathematica	code	    theta -> thetaExpr,
mathematica	blank	
mathematica	comment	    (* If ShiftBCoeff=0 or theta ShiftGammaCoeff=0, then B^i is not
mathematica	comment	       evolved, in the sense that it does not influence the time
mathematica	comment	       evolution of other variables.  *)
mathematica	code	    B[ua] -> IfThen [ShiftGammaCoeff ShiftBCoeff != 0,
mathematica	code	                     1 / (theta ShiftGammaCoeff)
mathematica	code	                     (+ admdtbeta[ua]
mathematica	code	                      - ShiftAdvectionCoeff Upwind[beta[ub], beta[ua], lb]),
mathematica	code	                     0]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	comment	(* Initialise the Gamma variables to 0.  This is necessary with
mathematica	comment	   multipatch because convertFromADMBaseGamma does not perform the
mathematica	comment	   conversion in the boundary points, and the order in which symmetry
mathematica	comment	   (interpatch) and outer boundary conditions is applied means that
mathematica	comment	   points which are both interpatch and symmetry points are never
mathematica	comment	   initialised. *)
mathematica	code	initGammaCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_InitGamma",
mathematica	code	  Schedule -> {"AT initial BEFORE " <> thorn <> "_convertFromADMBaseGamma"},
mathematica	code	  ConditionalOnKeyword -> {"my_initial_data", "ADMBase"},
mathematica	code	  Where -> Everywhere,
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    Xt[ua] -> 0,
mathematica	code	    A      -> 0,
mathematica	code	    B[ua]  -> 0
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	blank	
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Convert to ADMBase *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	convertToADMBaseCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_convertToADMBase",
mathematica	code	  Schedule -> {"IN " <> thorn <> "_convertToADMBaseGroup"},
mathematica	code	  Where -> Everywhere,
mathematica	code	  Shorthands -> {e4phi},
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    e4phi       -> IfThen[conformalMethod==CMW, 1/phi^2, Exp[4 phi]],
mathematica	code	    admg[la,lb] -> e4phi gt[la,lb],
mathematica	code	    admK[la,lb] -> e4phi At[la,lb] + (1/3) admg[la,lb] trK,
mathematica	code	    admalpha    -> alpha,
mathematica	code	    admbeta[ua] -> beta[ua]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	convertToADMBaseDtLapseShiftCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_convertToADMBaseDtLapseShift",
mathematica	code	  Schedule -> {"IN " <> thorn <> "_convertToADMBaseGroup"},
mathematica	code	  ConditionalOnKeyword -> {"dt_lapse_shift_method", "correct"},
mathematica	code	  Where -> Interior,
mathematica	code	  Shorthands -> {dir[ua], detgt, gtu[ua,ub], eta, theta},
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    dir[ua] -> Sign[beta[ua]],
mathematica	blank	
mathematica	code	    detgt -> 1 (* detgtExpr *),
mathematica	comment	    (* This leads to simpler code... *)
mathematica	code	    gtu[ua,ub]   -> 1/detgt detgtExpr MatrixInverse [gt[ua,ub]],
mathematica	blank	
mathematica	code	    eta -> etaExpr,
mathematica	code	    theta -> thetaExpr,
mathematica	blank	
mathematica	comment	    (* see RHS *)
mathematica	comment	(*
mathematica	comment	    admdtalpha -> - harmonicF alpha^harmonicN
mathematica	comment	                    ((1 - LapseAdvectionCoeff) A + LapseAdvectionCoeff trK)
mathematica	comment	                  + LapseAdvectionCoeff beta[ua] PDu[alpha,la],
mathematica	comment	*)
mathematica	code	    admdtalpha -> - harmonicF alpha^harmonicN
mathematica	code	                    (+ LapseACoeff       A
mathematica	code	                     + ((1 - LapseACoeff)
mathematica	code	                        (trK - IfCCZ4[2 Theta, 0])))
mathematica	code	                  + LapseAdvectionCoeff Upwind[beta[ua], alpha, la],
mathematica	code	    admdtbeta[ua] -> IfThen[harmonicShift,
mathematica	code	                            - 1/2 gtu[ua,uj] phi alpha
mathematica	code	                              (- 2 alpha PD[phi,lj]
mathematica	code	                               + 2 phi PD[alpha,lj]
mathematica	code	                               + gtu[uk,ul] phi alpha
mathematica	code	                                 (PD[gt[lk,ll],lj] - 2 PD[gt[lj,lk],ll])),
mathematica	comment	                            (* else *)
mathematica	code	                            + theta ShiftGammaCoeff
mathematica	code	                              (+ ShiftBCoeff B[ua]
mathematica	code	                               + (1 - ShiftBCoeff)
mathematica	code	                                 (Xt[ua] - eta BetaDriver beta[ua]))]
mathematica	code	                     + ShiftAdvectionCoeff Upwind[beta[ub], beta[ua], lb]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	convertToADMBaseDtLapseShiftBoundaryCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_convertToADMBaseDtLapseShiftBoundary",
mathematica	code	  Schedule -> {"IN " <> thorn <> "_convertToADMBaseGroup"},
mathematica	code	  ConditionalOnKeyword -> {"dt_lapse_shift_method", "correct"},
mathematica	code	  Where -> BoundaryWithGhosts,
mathematica	code	  Shorthands -> {detgt, gtu[ua,ub], eta, theta},
mathematica	code	  Equations ->
mathematica	code	  {
mathematica	code	    detgt -> 1 (* detgtExpr *),
mathematica	comment	    (* This leads to simpler code... *)
mathematica	code	    gtu[ua,ub]   -> 1/detgt detgtExpr MatrixInverse [gt[ua,ub]],
mathematica	blank	
mathematica	code	    eta -> etaExpr,
mathematica	code	    theta -> thetaExpr,
mathematica	blank	
mathematica	comment	    (* see RHS, but omit derivatives near the boundary *)
mathematica	comment	(*
mathematica	comment	    admdtalpha -> - harmonicF alpha^harmonicN
mathematica	comment	                    ((1 - LapseAdvectionCoeff) A + LapseAdvectionCoeff trK),
mathematica	comment	*)
mathematica	code	    admdtalpha -> - harmonicF alpha^harmonicN
mathematica	code	                    (+ LapseACoeff       A
mathematica	code	                     + ((1 - LapseACoeff)
mathematica	code	                        (trK - IfCCZ4[2 Theta, 0]))),
mathematica	code	    admdtbeta[ua] -> IfThen[harmonicShift,
mathematica	code	                            0,
mathematica	comment	                            (* else *)
mathematica	code	                            + theta ShiftGammaCoeff
mathematica	code	                              (+ ShiftBCoeff B[ua]
mathematica	code	                               + (1 - ShiftBCoeff)
mathematica	code	                                 (Xt[ua] - eta BetaDriver beta[ua]))]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	convertToADMBaseFakeDtLapseShiftCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_convertToADMBaseFakeDtLapseShift",
mathematica	code	  Schedule -> {"IN " <> thorn <> "_convertToADMBaseGroup"},
mathematica	code	  ConditionalOnKeyword -> {"dt_lapse_shift_method", "noLapseShiftAdvection"},
mathematica	code	  Where -> Everywhere,
mathematica	code	  Shorthands -> {detgt, gtu[ua,ub], eta, theta},
mathematica	code	  Equations ->
mathematica	code	  {
mathematica	code	    detgt -> 1 (* detgtExpr *),
mathematica	comment	    (* This leads to simpler code... *)
mathematica	code	    gtu[ua,ub]   -> 1/detgt detgtExpr MatrixInverse [gt[ua,ub]],
mathematica	blank	
mathematica	code	    eta -> etaExpr,
mathematica	code	    theta -> thetaExpr,
mathematica	blank	
mathematica	comment	    (* see RHS, but omit derivatives everywhere (which is wrong, but
mathematica	comment	       faster, since it does not require synchronisation or boundary
mathematica	comment	       conditions) *)
mathematica	comment	(*
mathematica	comment	    admdtalpha -> - harmonicF alpha^harmonicN
mathematica	comment	                    ((1 - LapseAdvectionCoeff) A + LapseAdvectionCoeff trK),
mathematica	comment	*)
mathematica	code	    admdtalpha -> - harmonicF alpha^harmonicN
mathematica	code	                    (+ LapseACoeff       A
mathematica	code	                     + ((1 - LapseACoeff)
mathematica	code	                        (trK - IfCCZ4[2 Theta, 0]))),
mathematica	code	    admdtbeta[ua] -> IfThen[harmonicShift,
mathematica	code	                            0,
mathematica	comment	                            (* else *)
mathematica	code	                            + theta ShiftGammaCoeff
mathematica	code	                              (+ ShiftBCoeff B[ua]
mathematica	code	                               + (1 - ShiftBCoeff)
mathematica	code	                                 (Xt[ua] - eta BetaDriver beta[ua]))]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Evolution equations *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	evolCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_RHS",
mathematica	code	  Schedule -> {"IN " <> thorn <> "_evolCalcGroup"},
mathematica	comment	  (*
mathematica	comment	  Where -> Interior,
mathematica	comment	  *)
mathematica	comment	  (* Synchronise the RHS grid functions after this routine, so that
mathematica	comment	     the refinement boundaries are set correctly before applying the
mathematica	comment	     radiative boundary conditions.  *)
mathematica	code	  Where -> InteriorNoSync,
mathematica	code	  ConditionalOnKeyword -> {"RHS_split", "combined"},
mathematica	code	  Shorthands -> {dir[ua],
mathematica	code	                 detgt, gtu[ua,ub],
mathematica	code	                 Gt[ua,lb,lc], Gtl[la,lb,lc], Gtlu[la,lb,uc], Xtn[ua],
mathematica	code	                 Rt[la,lb], Rphi[la,lb], R[la,lb],
mathematica	code	                 Atm[ua,lb], Atu[ua,ub],
mathematica	code	                 e4phi, em4phi, cdphi[la], cdphi2[la,lb], g[la,lb], detg,
mathematica	code	                 gu[ua,ub], Ats[la,lb], trAts, eta, theta,
mathematica	code	                 rho, S[la], trS, fac1, fac2, dottrK, dotXt[ua],
mathematica	code	                 epsdiss[ua], IfCCZ4[Z[ua]], IfCCZ4[dotTheta]},
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    dir[ua] -> Sign[beta[ua]],
mathematica	blank	
mathematica	code	    detgt -> 1 (* detgtExpr *),
mathematica	blank	
mathematica	comment	    (* This leads to simpler code... *)
mathematica	code	    gtu[ua,ub]   -> 1/detgt detgtExpr MatrixInverse [gt[ua,ub]],
mathematica	code	    Gtl[la,lb,lc]  -> 1/2
mathematica	code	                      (PD[gt[lb,la],lc] + PD[gt[lc,la],lb] - PD[gt[lb,lc],la]),
mathematica	code	    Gtlu[la,lb,uc] -> gtu[uc,ud] Gtl[la,lb,ld],
mathematica	code	    Gt[ua,lb,lc]   -> gtu[ua,ud] Gtl[ld,lb,lc],
mathematica	blank	
mathematica	comment	    (* The conformal connection functions calculated from the conformal metric,
mathematica	comment	       used instead of Xt where no derivatives of Xt are taken *)
mathematica	code	    Xtn[ui] -> gtu[uj,uk] Gt[ui,lj,lk],
mathematica	blank	
mathematica	code	    e4phi       -> IfThen[conformalMethod==CMW, 1/phi^2, Exp[4 phi]],
mathematica	code	    em4phi      -> 1 / e4phi,
mathematica	code	    g[la,lb]    -> e4phi gt[la,lb],
mathematica	code	    detg        -> detgExpr,
mathematica	code	    gu[ua,ub]   -> em4phi gtu[ua,ub],
mathematica	blank	
mathematica	comment	    (* The Z quantities *)
mathematica	comment	    (* gr-qc:1106.2254 (2011), eqn. (23) *)
mathematica	code	    IfCCZ4[
mathematica	code	      Z[ud] -> (1/2) gu[ua,ud] (- PD[gt[la,lb],lc] gtu[ub,uc] + gt[la,lc] Xt[uc])
mathematica	code	    ],
mathematica	blank	
mathematica	comment	    (* PRD 62, 044034 (2000), eqn. (18) *)
mathematica	comment	    (* Adding Z term by changing Xtn to Xt *)
mathematica	code	    Rt[li,lj] -> - (1/2) gtu[ul,um] PD[gt[li,lj],ll,lm]
mathematica	code	                 + (1/2) gt[lk,li] PD[Xt[uk],lj]
mathematica	code	                 + (1/2) gt[lk,lj] PD[Xt[uk],li]
mathematica	code	                 + (1/2) Xtn[uk] Gtl[li,lj,lk]
mathematica	code	                 + (1/2) Xtn[uk] Gtl[lj,li,lk]
mathematica	code	                 + (+ Gt[uk,li,ll] Gtlu[lj,lk,ul]
mathematica	code	                    + Gt[uk,lj,ll] Gtlu[li,lk,ul]
mathematica	code	                    + Gt[uk,li,ll] Gtlu[lk,lj,ul]),
mathematica	blank	
mathematica	code	    fac1 -> IfThen[conformalMethod==CMW, -1/(2 phi), 1],
mathematica	code	    cdphi[la] -> fac1 CDt[phi,la],
mathematica	code	    fac2 -> IfThen[conformalMethod==CMW, 1/(2 phi^2), 0],
mathematica	code	    cdphi2[la,lb] -> fac1 CDt[phi,la,lb] + fac2 CDt[phi,la] CDt[phi,lb],
mathematica	blank	
mathematica	comment	    (* PRD 62, 044034 (2000), eqn. (15) *)
mathematica	code	    Rphi[li,lj] -> - 2 cdphi2[lj,li]
mathematica	code	                   - 2 gt[li,lj] gtu[ul,un] cdphi2[ll,ln]
mathematica	code	                   + 4 cdphi[li] cdphi[lj]
mathematica	code	                   - 4 gt[li,lj] gtu[ul,un] cdphi[ln] cdphi[ll],
mathematica	blank	
mathematica	code	    Atm[ua,lb] -> gtu[ua,uc] At[lc,lb],
mathematica	code	    Atu[ua,ub] -> Atm[ua,lc] gtu[ub,uc],
mathematica	blank	
mathematica	code	    R[la,lb] -> Rt[la,lb] + Rphi[la,lb],
mathematica	code	    IfCCZ4[
mathematica	code	      R[la,lb] -> R[la,lb] + (2/phi) (+ g[la,lc] Z[uc] PD[phi,lb]
mathematica	code	        + g[lb,lc] Z[uc] PD[phi,la] - g[la,lb] Z[uc] PD[phi,lc])
mathematica	code	        + e4phi Z[uc] PD[gt[la,lb],lc]
mathematica	code	    ],
mathematica	blank	
mathematica	comment	    (* Matter terms *)
mathematica	blank	
mathematica	comment	    (* rho = n^a n^b T_ab *)
mathematica	code	    rho -> addMatter
mathematica	code	           (1/alpha^2 (T00 - 2 beta[ui] T0[li] + beta[ui] beta[uj] T[li,lj])),
mathematica	blank	
mathematica	comment	    (* S_i = -p^a_i n^b T_ab, where p^a_i = delta^a_i + n^a n_i *)
mathematica	code	    S[li] -> addMatter (-1/alpha (T0[li] - beta[uj] T[li,lj])),
mathematica	blank	
mathematica	comment	    (* trS = gamma^ij T_ij  *)
mathematica	code	    trS -> addMatter (em4phi gtu[ui,uj] T[li,lj]),
mathematica	blank	
mathematica	comment	    (* RHS terms *)
mathematica	blank	
mathematica	comment	    (* PRD 62, 044034 (2000), eqn. (10) *)
mathematica	comment	    (* PRD 67 084023 (2003), eqn. (16) and (23) *)
mathematica	code	    dot[phi]       -> IfThen[conformalMethod==CMW, 1/3 phi, -1/6]
mathematica	code	                      (alpha trK - PD[beta[ua],la]),
mathematica	blank	
mathematica	comment	    (* PRD 62, 044034 (2000), eqn. (9) *)
mathematica	comment	    (* gr-qc:1106.2254 (2011), eqn. (14) *)
mathematica	comment	    (* removing trA from Aij ensures that detg = 1 *)
mathematica	code	    dot[gt[la,lb]] -> - 2 alpha (At[la,lb] - IfCCZ4[(1/3) At[lc,ld] gtu[uc,ud] gt[la,lb], 0])
mathematica	code	                      + gt[la,lc] PD[beta[uc],lb] + gt[lb,lc] PD[beta[uc],la]
mathematica	code	                      - (2/3) gt[la,lb] PD[beta[uc],lc],
mathematica	comment	    (* PRD 62, 044034 (2000), eqn. (20) *)
mathematica	comment	    (* PRD 67 084023 (2003), eqn (26) *)
mathematica	comment	    (* gr-qc:1106.2254 (2011), eqn. (19) *)
mathematica	comment	    (* Adding Z terms by changing Xtn to Xt,
mathematica	comment	       also adding extra Z and Theta terms *)
mathematica	code	    dotXt[ui]      -> - 2 Atu[ui,uj] PD[alpha,lj]
mathematica	code	                      + 2 alpha (+ Gt[ui,lj,lk] Atu[uk,uj]
mathematica	code	                                 - (2/3) gtu[ui,uj] PD[trK,lj]
mathematica	code	                                 + 6 Atu[ui,uj] cdphi[lj])
mathematica	code	                      + gtu[uj,ul] PD[beta[ui],lj,ll]
mathematica	code	                      + (1/3) gtu[ui,uj] PD[beta[ul],lj,ll]
mathematica	code	                      - Xtn[uj] PD[beta[ui],lj] 
mathematica	code	                      + (2/3) Xtn[ui] PD[beta[uj],lj]
mathematica	code	                      + IfCCZ4[
mathematica	code	                               + GammaShift 2 e4phi (- Z[uj] PD[beta[ui],lj]
mathematica	code	                                                 + (2/3) Z[ui] PD[beta[uj],lj])
mathematica	code	                               - (4/3) alpha e4phi Z[ui] trK
mathematica	code	                               + 2 gtu[ui,uj] (+ alpha PD[Theta,lj]
mathematica	code	                                               - Theta PD[alpha,lj])
mathematica	code	                               - 2 alpha e4phi dampk1 Z[ui],
mathematica	code	                        0]
mathematica	comment	    (* Equation (4.28) in Baumgarte & Shapiro (Phys. Rept. 376 (2003) 41-131) *)
mathematica	code	                      + addMatter (- 16 Pi alpha gtu[ui,uj] S[lj]),
mathematica	code	    dot[Xt[ui]]    -> dotXt[ui],
mathematica	blank	
mathematica	comment	    (* gr-qc:1106.2254 (2011), eqn. (18) *)
mathematica	code	    IfCCZ4[
mathematica	code	      dotTheta ->
mathematica	code	        - PD[alpha,la] Z[ua] - dampk1 (2 + dampk2) alpha Theta
mathematica	code	        + (1/2) alpha (gu[ua,ub] R[la,lb] - Atm[ua,lb] Atm[ub,la] + (2/3) trK^2 - 2 trK Theta) 
mathematica	code	        + addMatter (- 8 Pi alpha rho)
mathematica	code	    ],
mathematica	blank	
mathematica	code	    IfCCZ4[
mathematica	code	      dot[Theta] -> dotTheta
mathematica	code	    ],
mathematica	blank	
mathematica	comment	    (* PRD 62, 044034 (2000), eqn. (11) *)
mathematica	comment	    (* gr-qc:1106.2254 (2011), eqn. (17) *)
mathematica	comment	    (* Adding the RHS of Theta to K, because K_Z4 = K_BSSN + 2 Theta *)
mathematica	comment	    (* Also adding the Z term, as it has to cancel with the one in Theta *)
mathematica	code	    dottrK         -> - em4phi ( gtu[ua,ub] ( PD[alpha,la,lb]
mathematica	code	                                + 2 cdphi[la] PD[alpha,lb] )
mathematica	code	                                - Xtn[ua] PD[alpha,la] )
mathematica	code	                      + alpha (Atm[ua,lb] Atm[ub,la] + (1/3) trK^2)
mathematica	code	                      + IfCCZ4[
mathematica	code	                               + 2 dotTheta + 2 PD[alpha,la] Z[ua]
mathematica	code	                               + dampk1 (1 - dampk2) alpha Theta,
mathematica	code	                               0]
mathematica	comment	    (* Equation (4.21) in Baumgarte & Shapiro (Phys. Rept. 376 (2003) 41-131) *)
mathematica	code	                      + addMatter (4 Pi alpha (rho + trS)),
mathematica	code	    dot[trK]       -> dottrK,
mathematica	blank	
mathematica	comment	    (* PRD 62, 044034 (2000), eqn. (12) *)
mathematica	comment	    (* TODO: Should we use the Hamiltonian constraint to make Rij tracefree? *)
mathematica	comment	    (* gr-qc:1106.2254 (2011), eqn. (15) *)
mathematica	comment	    (* Adding Z terms in the Ricci and Theta terms *)
mathematica	code	    Ats[la,lb]     -> - CDt[alpha,la,lb] +
mathematica	code	                      + 2 (PD[alpha,la] cdphi[lb] + PD[alpha,lb] cdphi[la] )
mathematica	code	                      + alpha R[la,lb],
mathematica	code	    trAts          -> gu[ua,ub] Ats[la,lb],
mathematica	code	    dot[At[la,lb]] -> + em4phi (+ Ats[la,lb] - (1/3) g[la,lb] trAts )
mathematica	code	                      + alpha (+ ((trK - IfCCZ4[2 Theta, 0])
mathematica	code	                                  At[la,lb])
mathematica	code	                               - 2 At[la,lc] Atm[uc,lb])
mathematica	code	                      + At[la,lc] PD[beta[uc],lb] + At[lb,lc] PD[beta[uc],la]
mathematica	code	                      - (2/3) At[la,lb] PD[beta[uc],lc]
mathematica	comment	    (* Equation (4.23) in Baumgarte & Shapiro (Phys. Rept. 376 (2003) 41-131) *)
mathematica	code	                      + addMatter (- em4phi alpha 8 Pi
mathematica	code	                                     (T[la,lb] - (1/3) g[la,lb] trS)),
mathematica	blank	
mathematica	comment	    (* dot[alpha] -> - harmonicF alpha^harmonicN trK, *)
mathematica	comment	    (* dot[alpha] -> - harmonicF alpha^harmonicN A + Lie[alpha, beta], *)
mathematica	comment	(*
mathematica	comment	    dot[alpha] -> - harmonicF alpha^harmonicN (
mathematica	comment	                    (1 - LapseAdvectionCoeff) A + LapseAdvectionCoeff trK)
mathematica	comment	                  + LapseAdvectionCoeff beta[ua] PDu[alpha,la],
mathematica	comment	    dot[A]     -> (1 - LapseAdvectionCoeff) (dottrK - AlphaDriver A),
mathematica	comment	*)
mathematica	code	    dot[alpha] -> - harmonicF alpha^harmonicN
mathematica	code	                    (+ LapseACoeff       A
mathematica	code	                     + ((1 - LapseACoeff)
mathematica	code	                        (+ trK - IfCCZ4[2 Theta, 0]
mathematica	code	                         + AlphaDriver (alpha - 1)))),
mathematica	blank	
mathematica	code	    dot[A]     -> + (LapseACoeff
mathematica	code	                     (+ dottrK - IfCCZ4[2 dotTheta, 0]
mathematica	code	                      - AlphaDriver A)),
mathematica	blank	
mathematica	code	    eta -> etaExpr,
mathematica	code	    theta -> thetaExpr,
mathematica	blank	
mathematica	comment	    (* dot[beta[ua]] -> eta Xt[ua], *)
mathematica	comment	    (* dot[beta[ua]] -> ShiftGammaCoeff alpha^ShiftAlphaPower B[ua], *)
mathematica	code	    dot[beta[ua]] -> IfThen[harmonicShift,
mathematica	code	                            - 1/2 gtu[ua,uj] phi alpha
mathematica	code	                              (- 2 alpha PD[phi,lj]
mathematica	code	                               + 2 phi PD[alpha,lj]
mathematica	code	                               + gtu[uk,ul] phi alpha
mathematica	code	                                 (PD[gt[lk,ll],lj] - 2 PD[gt[lj,lk],ll])),
mathematica	comment	                            (* else *)
mathematica	code	                            + theta ShiftGammaCoeff
mathematica	code	                              (+ ShiftBCoeff B[ua]
mathematica	code	                               + (1 - ShiftBCoeff)
mathematica	code	                                 (Xt[ua] - eta BetaDriver beta[ua]))],
mathematica	blank	
mathematica	code	    dot[B[ua]]    -> + ShiftBCoeff (dotXt[ua] - eta BetaDriver B[ua])
mathematica	comment	      (* Note that this dotXt[ua] is not yet \partial_t \tilde \Gamma^i, because the
mathematica	comment	         advection term has not yet been added.  It is actually
mathematica	comment	         \partial_t \tilde \Gamma^i - \beta^j \partial_j \tilde \Gamma^i *)
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	advectCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_Advect",
mathematica	code	  Schedule -> {"IN " <> thorn <> "_evolCalcGroup " <>
mathematica	code	               "AFTER (" <> thorn <> "_RHS " <> thorn <> "_RHS1 " <> thorn <> "_RHS2)"},
mathematica	comment	  (*
mathematica	comment	  Where -> Interior,
mathematica	comment	  *)
mathematica	comment	  (* Synchronise the RHS grid functions after this routine, so that
mathematica	comment	     the refinement boundaries are set correctly before applying the
mathematica	comment	     radiative boundary conditions.  *)
mathematica	code	  Where -> InteriorNoSync,
mathematica	code	  ConditionalOnKeyword -> {"advection_split", "combined"},
mathematica	code	  Shorthands -> {dir[ua]},
mathematica	code	  Equations ->
mathematica	code	  {
mathematica	code	           dir[ua] -> Sign[beta[ua]],
mathematica	blank	
mathematica	code	          dot[phi] -> dot[phi] + Upwind[beta[ua], phi, la],
mathematica	blank	
mathematica	code	    dot[gt[la,lb]] -> dot[gt[la,lb]] + Upwind[beta[uc], gt[la,lb], lc],
mathematica	blank	
mathematica	code	       dot[Xt[ui]] -> dot[Xt[ui]] + Upwind[beta[uj], Xt[ui], lj],
mathematica	blank	
mathematica	code	    IfCCZ4[
mathematica	code	        dot[Theta] -> dot[Theta] + Upwind[beta[ua], Theta, la]
mathematica	code	    ],
mathematica	blank	
mathematica	code	          dot[trK] -> dot[trK] + Upwind[beta[ua], trK, la],
mathematica	blank	
mathematica	code	    dot[At[la,lb]] -> dot[At[la,lb]] + Upwind[beta[uc], At[la,lb], lc],
mathematica	blank	
mathematica	code	        dot[alpha] -> dot[alpha]
mathematica	code	                      + LapseAdvectionCoeff Upwind[beta[ua], alpha, la],
mathematica	blank	
mathematica	code	            dot[A] -> dot[A]
mathematica	code	                      + LapseACoeff (
mathematica	code	                        + LapseAdvectionCoeff       Upwind[beta[ua], A, la]
mathematica	code	                        + (1 - LapseAdvectionCoeff) Upwind[beta[ua], trK, la]),
mathematica	blank	
mathematica	code	     dot[beta[ua]] -> dot[beta[ua]]
mathematica	code	                      + ShiftAdvectionCoeff Upwind[beta[ub], beta[ua], lb],
mathematica	blank	
mathematica	code	        dot[B[ua]] -> dot[B[ua]]
mathematica	code	                      + ShiftBCoeff (
mathematica	code	                        + ShiftAdvectionCoeff Upwind[beta[ub], B[ua], lb]
mathematica	code	                        + ((1 - ShiftAdvectionCoeff)
mathematica	code	                           Upwind[beta[ub], Xt[ua], lb]))
mathematica	comment	                      (* Note that the advection term \beta^j \partial_j \tilde \Gamma^i is not
mathematica	comment	                         subtracted here when ShiftAdvectionCoefficient == 1 because it was
mathematica	comment	                         implicitly subtracted before (see comment in previous calculation of
mathematica	comment	                         dot[B[ua]]. *)
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	varsNames = {
mathematica	code	  {"phi",   dot[phi]},
mathematica	code	  {"gt",    dot[gt[la,lb]]},
mathematica	code	  {"Xt",    dot[Xt[ui]]},
mathematica	code	  {"trK",   dot[trK]},
mathematica	code	  {"At",    dot[At[la,lb]]},
mathematica	code	  {"alpha", dot[alpha]},
mathematica	code	  {"A",     dot[A]},
mathematica	code	  {"beta",  dot[beta[ua]]},
mathematica	code	  {"B",     dot[B[ua]]},
mathematica	code	  IfCCZ4[{"Theta", dot[Theta]}]
mathematica	code	            };
mathematica	blank	
mathematica	code	advectCalcs = Map[
mathematica	code	  PartialCalculation[advectCalc, "_"<>ToString[First[#]],
mathematica	code	                     {ConditionalOnKeyword -> {"advection_split",
mathematica	code	                                               "per variable"}},
mathematica	code	                     {Last[#]}]&,
mathematica	code	  varsNames];
mathematica	blank	
mathematica	code	evolCalc1 = PartialCalculation[evolCalc, "1",
mathematica	code	  {
mathematica	code	    ConditionalOnKeyword -> {"RHS_split", "split At"}
mathematica	code	  },
mathematica	code	  {
mathematica	code	    dot[phi],
mathematica	code	    dot[gt[la,lb]],
mathematica	code	    dot[Xt[ui]],
mathematica	code	    dot[trK],
mathematica	code	    dot[alpha],
mathematica	code	    dot[A],
mathematica	code	    dot[beta[ua]],
mathematica	code	    dot[B[ua]],
mathematica	code	    IfCCZ4[dot[Theta]]
mathematica	code	  }];
mathematica	blank	
mathematica	code	evolCalc2 = PartialCalculation[evolCalc, "2",
mathematica	code	  {
mathematica	code	    ConditionalOnKeyword -> {"RHS_split", "split At"}
mathematica	code	  },
mathematica	code	  {
mathematica	code	    dot[At[la,lb]]
mathematica	code	  }];
mathematica	blank	
mathematica	code	dissCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_Dissipation",
mathematica	code	  Schedule -> {"IN " <> thorn <> "_evolCalcGroup " <>
mathematica	code	               "AFTER (" <> thorn <> "_RHS1 " <> thorn <> "_RHS2)"},
mathematica	code	  ConditionalOnKeyword -> {"apply_dissipation", "always"},
mathematica	code	  Where -> InteriorNoSync,
mathematica	code	  Shorthands -> {epsdiss[ua]},
mathematica	code	  Equations ->
mathematica	code	  {
mathematica	code	    epsdiss[ua] -> EpsDiss,
mathematica	code	    Sequence@@Table[
mathematica	code	      dot[var]       -> dot[var] + epsdiss[ux] PDdiss[var,lx],
mathematica	code	      {var, {phi, gt[la,lb], Xt[ui], IfCCZ4[Theta], trK, At[la,lb],
mathematica	code	             alpha, A, beta[ua], B[ua]}}]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	dissCalcs =
mathematica	code	Table[
mathematica	code	{
mathematica	code	  Name -> thorn <> "_Dissipation_" <> ToString[var /. {Tensor[n_,__] -> n}],
mathematica	code	  Schedule -> {"IN " <> thorn <> "_evolCalcGroup " <>
mathematica	code	               "AFTER (" <> thorn <> "_RHS1 " <> thorn <> "_RHS2)"},
mathematica	code	  ConditionalOnKeyword -> {"apply_dissipation", "always"},
mathematica	code	  Where -> InteriorNoSync,
mathematica	code	  Shorthands -> {epsdiss[ua]},
mathematica	code	  Equations ->
mathematica	code	  {
mathematica	code	    epsdiss[ua] -> EpsDiss,
mathematica	code	    dot[var]    -> dot[var] + epsdiss[ux] PDdiss[var,lx]
mathematica	code	  }
mathematica	code	},
mathematica	code	  {var, {phi, gt[la,lb], Xt[ui], IfCCZ4[Theta], trK, At[la,lb],
mathematica	code	         alpha, A, beta[ua], B[ua]}}
mathematica	code	];
mathematica	blank	
mathematica	code	RHSStaticBoundaryCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_RHSStaticBoundary",
mathematica	code	  Schedule -> {"IN MoL_CalcRHS"},
mathematica	code	  ConditionalOnKeyword -> {"my_rhs_boundary_condition", "static"},
mathematica	code	  Where -> Boundary,
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    dot[phi]       -> 0,
mathematica	code	    dot[gt[la,lb]] -> 0,
mathematica	code	    dot[trK]       -> 0,
mathematica	code	    dot[At[la,lb]] -> 0,
mathematica	code	    dot[Xt[ua]]    -> 0,
mathematica	code	    dot[alpha]     -> 0,
mathematica	code	    dot[A]         -> 0,
mathematica	code	    dot[beta[ua]]  -> 0,
mathematica	code	    dot[B[ua]]     -> 0,
mathematica	code	    IfCCZ4[dot[Theta] -> 0]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	comment	(* Initialise the RHS variables in analysis in case they are going to
mathematica	comment	   be output - the noninterior points cannot be filled, so we define
mathematica	comment	   them to be zero *)
mathematica	code	initRHSCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_InitRHS",
mathematica	code	  Schedule -> {"AT analysis BEFORE " <> thorn <> "_evolCalcGroup"},
mathematica	code	  Where -> Everywhere,
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    dot[phi]       -> 0,
mathematica	code	    dot[gt[la,lb]] -> 0,
mathematica	code	    dot[trK]       -> 0,
mathematica	code	    dot[At[la,lb]] -> 0,
mathematica	code	    dot[Xt[ua]]    -> 0,
mathematica	code	    dot[alpha]     -> 0,
mathematica	code	    dot[A]         -> 0,
mathematica	code	    dot[beta[ua]]  -> 0,
mathematica	code	    dot[B[ua]]     -> 0,
mathematica	code	    IfCCZ4[dot[Theta] -> 0]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	RHSRadiativeBoundaryCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_RHSRadiativeBoundary",
mathematica	code	  Schedule -> {"IN MoL_CalcRHS"},
mathematica	code	  ConditionalOnKeyword -> {"my_rhs_boundary_condition", "radiative"},
mathematica	code	  Where -> Boundary,
mathematica	code	  Shorthands -> {dir[ua],
mathematica	code	                 detgt, gtu[ua,ub], em4phi, gu[ua,ub],
mathematica	code	                 nn[la], nu[ua], nlen, nlen2, su[ua],
mathematica	code	                 vg},
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    dir[ua] -> Sign[normal[ua]],
mathematica	blank	
mathematica	code	    detgt      -> 1 (* detgtExpr *),
mathematica	code	    gtu[ua,ub] -> 1/detgt detgtExpr MatrixInverse [gt[ua,ub]],
mathematica	code	    em4phi     -> IfThen[conformalMethod==CMW, phi^2, Exp[-4 phi]],
mathematica	code	    gu[ua,ub]  -> em4phi gtu[ua,ub],
mathematica	blank	
mathematica	code	    nn[la] -> Euc[la,lb] normal[ub],
mathematica	code	    nu[ua] -> gu[ua,ub] nn[lb],
mathematica	code	    nlen2  -> nu[ua] nn[la],
mathematica	code	    nlen   -> Sqrt[nlen2],
mathematica	code	    su[ua] -> nu[ua] / nlen,
mathematica	blank	
mathematica	code	    vg -> Sqrt[harmonicF],
mathematica	blank	
mathematica	code	    dot[phi]       -> - vg su[uc] PDo[phi      ,lc],
mathematica	code	    dot[gt[la,lb]] -> -    su[uc] PDo[gt[la,lb],lc],
mathematica	code	    dot[trK]       -> - vg su[uc] PDo[trK      ,lc],
mathematica	code	    dot[At[la,lb]] -> -    su[uc] PDo[At[la,lb],lc],
mathematica	code	    dot[Xt[ua]]    -> -    su[uc] PDo[Xt[ua]   ,lc],
mathematica	code	    dot[alpha]     -> - vg su[uc] PDo[alpha    ,lc],
mathematica	code	    dot[A]         -> - vg su[uc] PDo[A        ,lc],
mathematica	code	    dot[beta[ua]]  -> -    su[uc] PDo[beta[ua] ,lc],
mathematica	code	    dot[B[ua]]     -> -    su[uc] PDo[B[ua]    ,lc],
mathematica	code	    IfCCZ4[
mathematica	code	      dot[Theta]   -> - vg su[uc] PDo[Theta    ,lc]
mathematica	code	    ]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	enforceCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_enforce",
mathematica	code	  Schedule -> {"IN MoL_PostStepModify"},
mathematica	code	  Shorthands -> {detgt, gtu[ua,ub], trAt},
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	comment	    (* The following comment is still interesting, but is not correct
mathematica	comment	       any more since it is now scheduled in MoL_PostStepModify instead:
mathematica	blank	
mathematica	comment	       Enforcing the constraints needs to be a projection, because it
mathematica	comment	       is applied in MoL_PostStep and may thus be applied multiple
mathematica	comment	       times, not only during time evolution. Therefore detgt has to
mathematica	comment	       be calculated correctly, without assuming that det gt_ij = 1,
mathematica	comment	       which is not always the case (since we don't enforce it). On
mathematica	comment	       the other hand, this may not be so important... *)
mathematica	code	    detgt -> 1 (* detgtExpr *),
mathematica	code	    gtu[ua,ub] -> 1/detgt detgtExpr MatrixInverse [gt[ua,ub]],
mathematica	blank	
mathematica	code	    trAt -> gtu[ua,ub] At[la,lb],
mathematica	blank	
mathematica	code	    At[la,lb] -> At[la,lb] - (1/3) gt[la,lb] trAt,
mathematica	blank	
mathematica	code	    alpha -> Max[alpha, MinimumLapse]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Boundary conditions *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	boundaryCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_boundary",
mathematica	code	  Schedule -> {"IN MoL_PostStep"},
mathematica	code	  ConditionalOnKeyword -> {"my_boundary_condition", "Minkowski"},
mathematica	code	  Where -> BoundaryWithGhosts,
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    phi       -> IfThen[conformalMethod==CMW, 1, 0],
mathematica	code	    gt[la,lb] -> KD[la,lb],
mathematica	code	    trK       -> 0,
mathematica	code	    At[la,lb] -> 0,
mathematica	code	    Xt[ua]    -> 0,
mathematica	code	    alpha     -> 1,
mathematica	code	    A         -> 0,
mathematica	code	    beta[ua]  -> 0,
mathematica	code	    B[ua]     -> 0,
mathematica	code	    IfCCZ4[Theta -> 0]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Constraint equations *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	constraintsCalc =
mathematica	code	{
mathematica	code	  Name -> thorn <> "_constraints",
mathematica	code	  Schedule -> Automatic,
mathematica	code	  After -> "MoL_PostStep",
mathematica	code	  Where -> Interior,
mathematica	code	  Shorthands -> {detgt, ddetgt[la], gtu[ua,ub], Z[ua],
mathematica	code	                 Gt[ua,lb,lc], Gtl[la,lb,lc], Gtlu[la,lb,uc], Xtn[ua],
mathematica	code	                 e4phi, em4phi,
mathematica	code	                 g[la,lb], detg, gu[ua,ub], ddetg[la], G[ua,lb,lc],
mathematica	code	                 Rt[la,lb], Rphi[la,lb], R[la,lb], trR, Atm[ua,lb],
mathematica	code	                 gK[la,lb,lc], cdphi[la], cdphi2[la,lb],
mathematica	code	                 rho, S[la], fac1, fac2},
mathematica	code	  Equations -> 
mathematica	code	  {
mathematica	code	    detgt        -> 1 (* detgtExpr *),
mathematica	code	    ddetgt[la]   -> 0 (* ddetgtExpr[la] *),
mathematica	blank	
mathematica	comment	    (* This leads to simpler code... *)
mathematica	code	    gtu[ua,ub]   -> 1/detgt detgtExpr MatrixInverse [gt[ua,ub]],
mathematica	code	    Gtl[la,lb,lc]  -> 1/2
mathematica	code	                      (PD[gt[lb,la],lc] + PD[gt[lc,la],lb] - PD[gt[lb,lc],la]),
mathematica	code	    Gtlu[la,lb,uc] -> gtu[uc,ud] Gtl[la,lb,ld],
mathematica	code	    Gt[ua,lb,lc]   -> gtu[ua,ud] Gtl[ld,lb,lc],
mathematica	blank	
mathematica	comment	    (* The conformal connection functions calculated from the conformal metric,
mathematica	comment	       used instead of Xt where no derivatives of Xt are taken *)
mathematica	code	    Xtn[ui] -> gtu[uj,uk] Gt[ui,lj,lk],
mathematica	blank	
mathematica	code	    e4phi       -> IfThen[conformalMethod==CMW, 1/phi^2, Exp[4 phi]],
mathematica	code	    em4phi      -> 1 / e4phi,
mathematica	code	    g[la,lb]    -> e4phi gt[la,lb],
mathematica	code	    detg        -> e4phi^3,
mathematica	code	    gu[ua,ub]   -> em4phi gtu[ua,ub],
mathematica	blank	
mathematica	comment	    (* The Z quantities *)
mathematica	code	    IfCCZ4[
mathematica	code	      Z[ud] -> (1/2) gu[ua,ud] (- PD[gt[la,lb],lc] gtu[ub,uc] + gt[la,lc] Xt[uc])
mathematica	code	    ],
mathematica	blank	
mathematica	comment	    (* PRD 62, 044034 (2000), eqn. (18) *)
mathematica	code	    Rt[li,lj] -> - (1/2) gtu[ul,um] PD[gt[li,lj],ll,lm]
mathematica	code	                 + (1/2) gt[lk,li] PD[Xt[uk],lj]
mathematica	code	                 + (1/2) gt[lk,lj] PD[Xt[uk],li]
mathematica	code	                 + (1/2) Xtn[uk] Gtl[li,lj,lk]
mathematica	code	                 + (1/2) Xtn[uk] Gtl[lj,li,lk]
mathematica	code	                 + (+ Gt[uk,li,ll] Gtlu[lj,lk,ul]
mathematica	code	                    + Gt[uk,lj,ll] Gtlu[li,lk,ul]
mathematica	code	                    + Gt[uk,li,ll] Gtlu[lk,lj,ul]),
mathematica	blank	
mathematica	comment	    (* From the long turducken paper.
mathematica	comment	       This expression seems to give the same result as the one from 044034.  *)
mathematica	comment	    (* TODO: symmetrise correctly: (ij) = (1/2) [i+j] *)
mathematica	comment	(*
mathematica	comment	    Rt[li,lj] -> - (1/2) gtu[uk,ul] PD[gt[li,lj],lk,ll]
mathematica	comment	                 + gt[lk,li] PD[Xt[uk],lj] + gt[lk,lj] PD[Xt[uk],li]
mathematica	comment	                 + gt[li,ln] Gt[un,lj,lk] gtu[um,ua] gtu[uk,ub] PD[gt[la,lb],lm]
mathematica	comment	                 + gt[lj,ln] Gt[un,li,lk] gtu[um,ua] gtu[uk,ub] PD[gt[la,lb],lm]
mathematica	comment	                 + gtu[ul,us] (+ 2 Gt[uk,ll,li] gt[lj,ln] Gt[un,lk,ls]
mathematica	comment	                               + 2 Gt[uk,ll,lj] gt[li,ln] Gt[un,lk,ls]
mathematica	comment	                               + Gt[uk,li,ls] gt[lk,ln] Gt[un,ll,lj]),
mathematica	comment	*)
mathematica	blank	
mathematica	comment	    (* Below would be a straightforward calculation,
mathematica	comment	       without taking any Gamma^i into account.
mathematica	comment	       This expression gives a different answer!  *)
mathematica	comment	(*
mathematica	comment	    Rt[la,lb] -> + Gt[u1,l2,la] Gt[l1,lb,u2] - Gt[u1,la,lb] Gt[l1,l2,u2]
mathematica	comment	                 + 1/2 gtu[u1,u2] (- PD[gt[l1,l2],la,lb] + PD[gt[l1,la],l2,lb]
mathematica	comment	                                   - PD[gt[la,lb],l1,l2] + PD[gt[l2,lb],l1,la]),
mathematica	comment	*)
mathematica	blank	
mathematica	code	    fac1 -> IfThen[conformalMethod==CMW, -1/(2 phi), 1],
mathematica	code	    cdphi[la] -> fac1 CDt[phi,la],
mathematica	code	    fac2 -> IfThen[conformalMethod==CMW, 1/(2 phi^2), 0],
mathematica	code	    cdphi2[la,lb] -> fac1 CDt[phi,la,lb] + fac2 CDt[phi,la] CDt[phi,lb],
mathematica	blank	
mathematica	comment	    (* PRD 62, 044034 (2000), eqn. (15) *)
mathematica	code	    Rphi[li,lj] -> - 2 cdphi2[lj,li]
mathematica	code	                   - 2 gt[li,lj] gtu[ul,un] cdphi2[ll,ln]
mathematica	code	                   + 4 cdphi[li] cdphi[lj]
mathematica	code	                   - 4 gt[li,lj] gtu[ul,un] cdphi[ln] cdphi[ll],
mathematica	blank	
mathematica	comment	    (* ddetg[la] -> PD[e4phi detg,la], *)
mathematica	code	    ddetg[la]   -> e4phi ddetgt[la] + 4 detgt e4phi PD[phi,la],
mathematica	comment	    (* TODO: check this equation, maybe simplify it by omitting ddetg *)
mathematica	code	    G[ua,lb,lc] -> Gt[ua,lb,lc]
mathematica	code	                   + 1/(2 detg) (+ KD[ua,lb] ddetg[lc] + KD[ua,lc] ddetg[lb]
mathematica	code	                                 - (1/3) g[lb,lc] gu[ua,ud] ddetg[ld]),
mathematica	blank	
mathematica	code	    R[la,lb] -> + Rt[la,lb] + Rphi[la,lb],
mathematica	blank	
mathematica	code	    IfCCZ4[
mathematica	code	      R[la,lb] -> R[la, lb] + (2/phi) (+ g[la,lc] Z[uc] PD[phi,lb]
mathematica	code	        + g[lb,lc] Z[uc] PD[phi,la] - g[la,lb] Z[uc] PD[phi,lc])
mathematica	code	        + e4phi Z[uc] PD[gt[la,lb],lc]
mathematica	code	    ],
mathematica	blank	
mathematica	code	    trR      -> gu[ua,ub] R[la,lb],
mathematica	blank	
mathematica	comment	    (* K[la,lb] -> e4phi At[la,lb] + (1/3) g[la,lb] trK, *)
mathematica	comment	    (* Km[ua,lb] -> gu[ua,uc] K[lc,lb], *)
mathematica	code	    Atm[ua,lb] -> gtu[ua,uc] At[lc,lb],
mathematica	blank	
mathematica	comment	    (* Matter terms *)
mathematica	blank	
mathematica	comment	    (* rho = n^a n^b T_ab *)
mathematica	code	    rho -> 1/alpha^2 (T00 - 2 beta[ui] T0[li] + beta[ui] beta[uj] T[li,lj]),
mathematica	blank	
mathematica	comment	    (* S_i = -p^a_i n^b T_ab, where p^a_i = delta^a_i + n^a n_i *)
mathematica	code	    S[li] -> -1/alpha (T0[li] - beta[uj] T[li,lj]),
mathematica	blank	
mathematica	comment	    (* Constraints *)
mathematica	blank	
mathematica	comment	    (* H -> trR - Km[ua,lb] Km[ub,la] + trK^2, *)
mathematica	comment	    (* PRD 67, 084023 (2003), eqn. (19) *)
mathematica	code	    H -> trR - Atm[ua,lb] Atm[ub,la] + (2/3) trK^2 - addMatter 16 Pi rho,
mathematica	blank	
mathematica	comment	    (* gK[la,lb,lc] -> CD[K[la,lb],lc], *)
mathematica	comment	(*    gK[la,lb,lc] -> + 4 e4phi PD[phi,lc] At[la,lb] + e4phi CD[At[la,lb],lc]
mathematica	comment	                    + (1/3) g[la,lb] PD[trK,lc],
mathematica	comment	    M[la] -> gu[ub,uc] (gK[lc,la,lb] - gK[lc,lb,la]), *)
mathematica	blank	
mathematica	code	    M[li] -> + gtu[uj,uk] (CDt[At[li,lj],lk] + 6 At[li,lj] cdphi[lk])
mathematica	code	             - (2/3) PD[trK,li]
mathematica	code	             - addMatter 8 Pi S[li],
mathematica	comment	    (* TODO: use PRD 67, 084023 (2003), eqn. (20) *)
mathematica	blank	
mathematica	comment	    (* det gamma-tilde *)
mathematica	code	    cS -> Log[detgt],
mathematica	blank	
mathematica	comment	    (* Gamma constraint *)
mathematica	code	    cXt[ua] -> gtu[ub,uc] Gt[ua,lb,lc] - Xt[ua],
mathematica	blank	
mathematica	comment	    (* trace A-tilde *)
mathematica	code	    cA -> gtu[ua,ub] At[la,lb]
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	constraintsCalc1 = PartialCalculation[constraintsCalc, "1",
mathematica	code	  {},
mathematica	code	  {
mathematica	code	    H
mathematica	code	  }];
mathematica	blank	
mathematica	code	constraintsCalc2 = PartialCalculation[constraintsCalc, "2",
mathematica	code	  {},
mathematica	code	  {
mathematica	code	    M[li],
mathematica	code	    cS,
mathematica	code	    cXt[ua],
mathematica	code	    cA
mathematica	code	  }];
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Implementations *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	inheritedImplementations =
mathematica	code	  Join[{"ADMBase"},
mathematica	code	       If [addMatter!=0, {"TmunuBase"}, {}]];
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Parameters *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	inheritedKeywordParameters = {};
mathematica	blank	
mathematica	code	extendedKeywordParameters =
mathematica	code	{
mathematica	code	  {
mathematica	code	    Name -> "ADMBase::evolution_method",
mathematica	code	    AllowedValues -> {thorn}
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "ADMBase::lapse_evolution_method",
mathematica	code	    AllowedValues -> {thorn}
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "ADMBase::shift_evolution_method",
mathematica	code	    AllowedValues -> {thorn}
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "ADMBase::dtlapse_evolution_method",
mathematica	code	    AllowedValues -> {thorn}
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "ADMBase::dtshift_evolution_method",
mathematica	code	    AllowedValues -> {thorn}
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	keywordParameters =
mathematica	code	{
mathematica	code	  {
mathematica	code	    Name -> "my_initial_data",
mathematica	comment	    (* Visibility -> "restricted", *)
mathematica	comment	    (* Description -> "ddd", *)
mathematica	code	    AllowedValues -> {"ADMBase", "Minkowski"},
mathematica	code	    Default -> "ADMBase"
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "my_initial_boundary_condition",
mathematica	code	    Visibility -> "restricted",
mathematica	comment	    (* Description -> "ddd", *)
mathematica	code	    AllowedValues -> {"none"},
mathematica	code	    Default -> "none"
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "my_rhs_boundary_condition",
mathematica	code	    Visibility -> "restricted",
mathematica	comment	    (* Description -> "ddd", *)
mathematica	code	    AllowedValues -> {"none", "static", "radiative"},
mathematica	code	    Default -> "none"
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "my_boundary_condition",
mathematica	comment	    (* Visibility -> "restricted", *)
mathematica	comment	    (* Description -> "ddd", *)
mathematica	code	    AllowedValues -> {"none", "Minkowski"},
mathematica	code	    Default -> "none"
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "calculate_ADMBase_variables_at",
mathematica	code	    Visibility -> "restricted",
mathematica	comment	    (* Description -> "ddd", *)
mathematica	code	    AllowedValues -> {"MoL_PostStep", "CCTK_EVOL", "CCTK_ANALYSIS"},
mathematica	code	    Default -> "MoL_PostStep"
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "UseSpatialBetaDriver_UNUSED",
mathematica	code	    Visibility -> "restricted",
mathematica	comment	    (* Description -> "ddd", *)
mathematica	code	    AllowedValues -> {"no", "yes"},
mathematica	code	    Default -> "no"
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "dt_lapse_shift_method",
mathematica	code	    Description -> "Treatment of ADMBase dtlapse and dtshift",
mathematica	code	    AllowedValues -> {"correct",
mathematica	code	                      "noLapseShiftAdvection" (* omit lapse and shift advection terms (faster) *)
mathematica	code	                     },
mathematica	code	    Default -> "correct"
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "apply_dissipation",
mathematica	code	    Description -> "Whether to apply dissipation to the RHSs",
mathematica	code	    AllowedValues -> {"always",
mathematica	code	                      "never" (* yes and no keyword values confuse Cactus, and Kranc
mathematica	comment	                                 doesn't support boolean parameters *)
mathematica	code	                     },
mathematica	code	    Default -> "never"
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "RHS_split",
mathematica	code	    Description -> "How to split RHS calculation",
mathematica	code	    AllowedValues -> {"combined",
mathematica	code	                      "split At"},
mathematica	code	    Default -> "split At"
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> "advection_split",
mathematica	code	    Description -> "How to split advection calculation",
mathematica	code	    AllowedValues -> {"combined",
mathematica	code	                      "per variable"},
mathematica	code	    Default -> "combined"
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	intParameters =
mathematica	code	{
mathematica	code	  {
mathematica	code	    Name -> harmonicN,
mathematica	code	    Description -> "d/dt alpha = - f alpha^n K  (harmonic=2, 1+log=1)",
mathematica	code	    Default -> 2
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> ShiftAlphaPower,
mathematica	code	    Default -> 0
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> conformalMethod,
mathematica	code	    Description -> "Treatment of conformal factor",
mathematica	code	    AllowedValues -> {{Value -> "0", Description -> "phi method"},
mathematica	code	                      {Value -> "1", Description -> "W method"}},
mathematica	code	    Default -> 0
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> fdOrder,
mathematica	code	    Default -> derivOrder,
mathematica	code	    AllowedValues -> {2,4,6,8}
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> harmonicShift,
mathematica	code	    Description -> "Whether to use the harmonic shift",
mathematica	code	    AllowedValues -> {{Value -> "0", Description -> "Gamma driver shift"},
mathematica	code	                      {Value -> "1", Description -> "Harmonic shift"}},
mathematica	code	    Default -> 0
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	code	realParameters =
mathematica	code	{
mathematica	code	  IfCCZ4[{
mathematica	code	    Name -> GammaShift,
mathematica	code	    Description -> "Covariant shift term in Gamma",
mathematica	code	    Default -> 0.5
mathematica	code	  }],   
mathematica	code	  IfCCZ4[{
mathematica	code	    Name -> dampk1,
mathematica	code	    Description -> "CCZ4 damping term 1 for Theta and Z",
mathematica	code	    Default -> 0
mathematica	code	  }],
mathematica	code	  IfCCZ4[{
mathematica	code	    Name -> dampk2,
mathematica	code	    Description -> "CCZ4 damping term 2 for Theta and Z",
mathematica	code	    Default -> 0
mathematica	code	  }],
mathematica	code	  {
mathematica	code	    Name -> LapseACoeff,
mathematica	code	    Description -> "Whether to evolve A in time",
mathematica	code	    Default -> 0
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> harmonicF,
mathematica	code	    Description -> "d/dt alpha = - f alpha^n K   (harmonic=1, 1+log=2)",
mathematica	code	    Default -> 1
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> AlphaDriver,
mathematica	code	    Default -> 0
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> ShiftBCoeff,
mathematica	code	    Description -> "Whether to evolve B^i in time",
mathematica	code	    Default -> 1
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> ShiftGammaCoeff,
mathematica	code	    Default -> 0
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> BetaDriver,
mathematica	code	    Default -> 0
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> LapseAdvectionCoeff,
mathematica	code	    Description -> "Factor in front of the lapse advection terms in 1+log",
mathematica	code	    Default -> 1
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> ShiftAdvectionCoeff,
mathematica	code	    Description -> "Factor in front of the shift advection terms in gamma driver",
mathematica	code	    Default -> 1
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> MinimumLapse,
mathematica	code	    Description -> "Minimum value of the lapse function",
mathematica	code	    Default -> -1
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> SpatialBetaDriverRadius,
mathematica	code	    Description -> "Radius at which the BetaDriver starts to be reduced",
mathematica	code	    AllowedValues -> {{Value -> "(0:*", Description -> "Positive"}},
mathematica	code	    Default -> 10^12
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> SpatialShiftGammaCoeffRadius,
mathematica	code	    Description -> "Radius at which the ShiftGammaCoefficient starts to be reduced",
mathematica	code	    AllowedValues -> {{Value -> "(0:*", Description -> "Positive"}},
mathematica	code	    Default -> 10^12
mathematica	code	  },
mathematica	code	  {
mathematica	code	    Name -> EpsDiss,
mathematica	code	    Description -> "Dissipation strength",
mathematica	code	    AllowedValues -> {{Value -> "(0:*", Description -> "Positive"}},
mathematica	code	    Default -> 0
mathematica	code	  }
mathematica	code	};
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Construct the thorns *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	code	calculations =
mathematica	code	Join[
mathematica	code	{
mathematica	code	  initialCalc,
mathematica	code	  convertFromADMBaseCalc,
mathematica	code	  initGammaCalc,
mathematica	code	  convertFromADMBaseGammaCalc,
mathematica	code	  evolCalc,
mathematica	code	  evolCalc1, evolCalc2,
mathematica	code	  dissCalc,
mathematica	code	  advectCalc,
mathematica	comment	  (*advectCalcs,*)
mathematica	code	  initRHSCalc,
mathematica	code	  RHSStaticBoundaryCalc,
mathematica	comment	  (* RHSRadiativeBoundaryCalc, *)
mathematica	code	  enforceCalc,
mathematica	code	  boundaryCalc,
mathematica	code	  convertToADMBaseCalc,
mathematica	code	  convertToADMBaseDtLapseShiftCalc,
mathematica	code	  convertToADMBaseDtLapseShiftBoundaryCalc,
mathematica	code	  convertToADMBaseFakeDtLapseShiftCalc,
mathematica	comment	  (* constraintsCalc, *)
mathematica	code	  constraintsCalc1, constraintsCalc2
mathematica	code	},
mathematica	code	  advectCalcs
mathematica	comment	  (*dissCalcs*)
mathematica	code	];
mathematica	blank	
mathematica	code	CreateKrancThornTT [groups, ".", thorn,
mathematica	code	  Calculations -> calculations,
mathematica	code	  DeclaredGroups -> declaredGroupNames,
mathematica	code	  PartialDerivatives -> derivatives,
mathematica	code	  EvolutionTimelevels -> evolutionTimelevels,
mathematica	code	  DefaultEvolutionTimelevels -> 3,
mathematica	code	  UseJacobian -> True,
mathematica	code	  UseLoopControl -> True,
mathematica	code	  UseVectors -> useVectors,
mathematica	code	  UseOpenCL -> useOpenCL,
mathematica	code	  InheritedImplementations -> inheritedImplementations,
mathematica	code	  InheritedKeywordParameters -> inheritedKeywordParameters,
mathematica	code	  ExtendedKeywordParameters -> extendedKeywordParameters,
mathematica	code	  KeywordParameters -> keywordParameters,
mathematica	code	  IntParameters -> intParameters,
mathematica	code	  RealParameters -> realParameters
mathematica	code	];
mathematica	blank	
mathematica	code	];
mathematica	blank	
mathematica	blank	
mathematica	blank	
mathematica	comment	(******************************************************************************)
mathematica	comment	(* Options *)
mathematica	comment	(******************************************************************************)
mathematica	blank	
mathematica	comment	(* These are the arguments to createComment:
mathematica	comment	   - derivative order: 2, 4, 6, 8, ...
mathematica	comment	   - useJacobian: False or True
mathematica	comment	   - split upwind derivatives: False or True
mathematica	comment	   - use vectorisation: False or True
mathematica	comment	   - use OpenCL: False or True
mathematica	comment	   - timelevels: 2 or 3
mathematica	comment	     ## (keep this at 3; this is better chosen with a run-time parameter)
mathematica	comment	   - matter: 0 or 1
mathematica	comment	     ## (matter seems cheap; it should be always enabled)
mathematica	comment	   - thorn base name
mathematica	comment	*)
mathematica	blank	
mathematica	code	createCode[4, False, True, True , False, 3, 1, "BSSN"];
mathematica	code	createCode[4, False, True, False, False, 3, 1, "BSSN"];
mathematica	code	createCode[4, False, True, True , True , 3, 1, "BSSN"];
mathematica	blank	
mathematica	code	createCode[4, False, True, True , False, 3, 1, "CCZ4"];
mathematica	blank