moved away from patch to use a placeholder pauvre
the way the patch ended up didn't make it really suitable for
upstream upload, as not standalone without the appropriate changes
in debian/.
Etienne Mollier
3 years ago
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#! /bin/bash
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# pauvre reimplementation in shell: the test suite expects its availability in
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# the PATH. Appropriate python environment is expected to be set in d/rules.
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set -ex
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exec python3 "$CURDIR/pauvre/pauvre_main.py" "$@"
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2to3.patch
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typo-redwood.patch
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test-local-pauvre.patch
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debian/patches/test-local-pauvre.patch
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Description: Use local "pauvre" for build testing
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The current testing in place embeds a shell script which makes the assumption
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that the command "pauvre" is available in the path of the tester. It would
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seem better to either carry out this test later in the package construction
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steps, or make sure that this is the working copy of pauvre_main.py which is
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being tested. This patch applies the second approach, to allow going a step
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further with build testing.
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Author: Étienne Mollier <etienne.mollier@mailoo.org>
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Forwarded: no
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Last-Update: 2020-04-25
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---
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This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
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--- python-pauvre.orig/pauvre/tests/test_synplot.py
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+++ python-pauvre/pauvre/tests/test_synplot.py
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@@ -51,7 +51,8 @@
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"""This verifies that the LibSeq class is constructed with all of the
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parameters that are present in the meraculous config files"""
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os.chdir(self.thisoutdir)
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- thiscommand = """pauvre synplot --aln_dir {0} \
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+ thiscommand = """python3 ../../../pauvre_main.py synplot \
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+ --aln_dir {0} \
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--fileform pdf \
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--gff_paths {1} {2} {3} \
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--center_on COX1 \
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override_dh_auto_test:
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ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
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export PYTHONPATH="$(CURDIR)" \
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&& dh_auto_test
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CURDIR="$(CURDIR)" \
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PATH="$(CURDIR)/debian/bin:$$PATH" \
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PYTHONPATH="$(CURDIR)" \
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dh_auto_test
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endif
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