// A. L. Delcher
//
// File: start-codon-distrib.hh
//
// Last Modified: 25 July 2005
//
// Declarations for start-codon-distrib.cc
#ifndef __START_CODON_DISTRIB_HH_INCLUDED
#define __START_CODON_DISTRIB_HH_INCLUDED
#include "delcher.hh"
#include "fasta.hh"
#include "gene.hh"
struct Count_Entry_t
{
char codon [4];
int count;
};
static bool Count_Entry_Cmp
(Count_Entry_t const & a, Count_Entry_t const & b);
static void Incr
(vector <Count_Entry_t> & entry, const char s [4]);
static void Parse_Command_Line
(int argc, char * argv []);
static long int Seq_Sub
(long int sub, long int seq_len);
static void Usage
(void);
#endif