// A. L. Delcher
//
// File: entropy-score.hh
//
// Last Modified: 29 July 2005
//
// Declarations for entropy-score.cc
#ifndef __ENTROPY_SCORE_HH_INCLUDED
#define __ENTROPY_SCORE_HH_INCLUDED
#include "delcher.hh"
#include "fasta.hh"
#include "gene.hh"
static double Entropy_Distance_Ratio
(const string & buff);
static int On_Seq
(int i, int seq_len);
static void Parse_Command_Line
(int argc, char * argv []);
static void Read_Entropy_Profiles
(const char * fn, bool & errflg);
static void Usage
(void);
#endif