Lintian Fixes - profbval

Ready changes

Merge these changes:

git pull https://janitor.debian.net/git/profbval lintian-fixes/main

Summary

  • Trim trailing whitespace. (file-contains-trailing-whitespace)
  • Set debhelper-compat version in Build-Depends. (uses-debhelper-compat-file)
  • Set upstream metadata fields: Bug-Submit (from ./configure).
  • Remove obsolete field Name from debian/upstream/metadata (already present in machine-readable debian/copyright).

Diff

diff --git a/debian/changelog b/debian/changelog
index a6ed90d..63d3e02 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,13 @@
+profbval (1.0.22-7) UNRELEASED; urgency=medium
+
+  * Trim trailing whitespace.
+  * Set debhelper-compat version in Build-Depends.
+  * Set upstream metadata fields: Bug-Submit (from ./configure).
+  * Remove obsolete field Name from debian/upstream/metadata (already
+    present in machine-readable debian/copyright).
+
+ -- Debian Janitor <janitor@jelmer.uk>  Wed, 29 Jan 2020 19:46:04 +0000
+
 profbval (1.0.22-6) unstable; urgency=medium
 
   * pp-popularity-contest only suggested
@@ -18,7 +28,7 @@ profbval (1.0.22-5) unstable; urgency=medium
 profbval (1.0.22-4) unstable; urgency=medium
 
   * Team upload.
-  * added allow-stderr restriction to debian/tests/control - in case when 
+  * added allow-stderr restriction to debian/tests/control - in case when
     recommended package `pp-popularity-contest` is not installed,
     and described that in debian/README.test
   * add hardening
@@ -28,7 +38,7 @@ profbval (1.0.22-4) unstable; urgency=medium
 profbval (1.0.22-3) unstable; urgency=medium
 
   * Team upload.
-  * changed citation in debian/upstream/metadata from search string to 
+  * changed citation in debian/upstream/metadata from search string to
     corresponding PMID article link
   * add simple testsuite
   * cme fix dpkg-control
diff --git a/debian/compat b/debian/compat
deleted file mode 100644
index b4de394..0000000
--- a/debian/compat
+++ /dev/null
@@ -1 +0,0 @@
-11
diff --git a/debian/control b/debian/control
index 2b1f06f..959562b 100644
--- a/debian/control
+++ b/debian/control
@@ -5,7 +5,7 @@ Uploaders: Laszlo Kajan <lkajan@rostlab.org>,
            Andreas Tille <tille@debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 11~),
+Build-Depends: debhelper-compat (= 11),
                perl
 Standards-Version: 4.2.1
 Vcs-Browser: https://salsa.debian.org/med-team/profbval
@@ -22,11 +22,11 @@ Recommends: blast2,
             profphd
 Suggests: pp-popularity-contest
 Description: predictor of flexible/rigid protein residues from sequence
- PROFbval can be useful for both protein structure and 
- function predictions. For instance, a biologist can locate potentially 
- antigenic determinants by identifying the most flexible residues on the 
- protein surface. Additionally, a crystallographer can locate residues that 
- potentially have high experimental B-values. 
+ PROFbval can be useful for both protein structure and
+ function predictions. For instance, a biologist can locate potentially
+ antigenic determinants by identifying the most flexible residues on the
+ protein surface. Additionally, a crystallographer can locate residues that
+ potentially have high experimental B-values.
  .
  PROFbval takes the following input, further described on profbval(1):
   * a protein sequence in a FASTA file
@@ -35,8 +35,8 @@ Description: predictor of flexible/rigid protein residues from sequence
  .
  Background: the mobility of a given residue on the protein surface is related
  to its functional role.
- Therefore, identification of extremely rigid or flexible 
- residues on the protein surface is helpful for identifying functionally 
- important residues in proteins. A common measure of atom mobility in proteins 
+ Therefore, identification of extremely rigid or flexible
+ residues on the protein surface is helpful for identifying functionally
+ important residues in proteins. A common measure of atom mobility in proteins
  is B-value data from x-ray crystallography structures. PROFbval is the first
  tool to predict normalized backbone B-values from amino-acid sequence.
diff --git a/debian/upstream/metadata b/debian/upstream/metadata
index 8f51b99..d700570 100644
--- a/debian/upstream/metadata
+++ b/debian/upstream/metadata
@@ -1,4 +1,4 @@
-Name: profbval
+Bug-Submit: https://rostlab.org/cgi-bin/bugzilla3/enter_bug.cgi?product=profbval
 Reference:
  - Author: Avner Schlessinger and Guy Yachdav and Burkhard Rost
    Title: >

Debdiff

File lists identical (after any substitutions)

No differences were encountered in the control files

Run locally

Try this locally (using the lintian-brush package):

debcheckout profbval
cd profbval
lintian-brush

More details

Full run details