Lintian Fixes - r-cran-metamix

• QA Page
• Maintainer email: r-pkg-team@alioth-lists.debian.net
• Automatic publish policy: main: push-derived , pristine-tar: push-derived , upstream: push-derived
• Last processed: 2023-06-26T00:37 (took 7m47s)
• Branch URL: https://salsa.debian.org/r-pkg-team/r-cran-metamix.git -b master (taken from version 0.3-2)
• Tags that might be fixable: debian-watch-does-not-check-openpgp-signature upstream-metadata-missing-bug-tracking upstream-metadata-missing-repository
• Queue position: 143945 (a 61w5d wait)

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Summary

• Bump debhelper from old 12 to 13. ( package-uses-old-debhelper-compat-version )
• Set field Upstream-Name in debian/copyright.
• Remove obsolete fields Contact, Name from debian/upstream/metadata (already present in machine-readable debian/copyright).
• Update standards version to 4.6.1, no changes needed. ( out-of-date-standards-version )
• Update standards version to 4.6.2, no changes needed. ( out-of-date-standards-version )

Lintian Result

• r-cran-metamix-dbgsym_0.3-3~jan+lint2_amd64.deb
• r-cran-metamix_0.3-3~jan+lint2.dsc
• r-cran-metamix_0.3-3~jan+lint2_amd64.buildinfo
• r-cran-metamix_0.3-3~jan+lint2_amd64.deb
• r-cran-metamix_0.3-3~jan+lint2_amd64.changes

Diff

diff --git a/debian/changelog b/debian/changelog
index 492b200..6af76bf 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,14 @@
+r-cran-metamix (0.3-3) UNRELEASED; urgency=medium
+
+  * Bump debhelper from old 12 to 13.
+  * Set field Upstream-Name in debian/copyright.
+  * Remove obsolete fields Contact, Name from debian/upstream/metadata (already
+    present in machine-readable debian/copyright).
+  * Update standards version to 4.6.1, no changes needed.
+  * Update standards version to 4.6.2, no changes needed.
+
+ -- Debian Janitor <janitor@jelmer.uk>  Sun, 20 Nov 2022 23:20:48 -0000
+
 r-cran-metamix (0.3-2) unstable; urgency=medium
 
   * Standards-Version: 4.5.0 (routine-update)
diff --git a/debian/control b/debian/control
index 17a37df..55eabcd 100644
--- a/debian/control
+++ b/debian/control
@@ -5,7 +5,7 @@ Uploaders: Alba Crespi <crespialba+debian@gmail.com>,
 Section: gnu-r
 Testsuite: autopkgtest-pkg-r
 Priority: optional
-Build-Depends: debhelper-compat (= 12),
+Build-Depends: debhelper-compat (= 13),
                dh-r,
                r-base-dev,
                libopenmpi-dev,
@@ -14,7 +14,7 @@ Build-Depends: debhelper-compat (= 12),
                r-cran-gtools,
                r-cran-rmpi,
                r-cran-ggplot2
-Standards-Version: 4.5.0
+Standards-Version: 4.6.2
 Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-cran-metamix
 Vcs-Git: https://salsa.debian.org/r-pkg-team/r-cran-metamix.git
 Homepage: https://cran.r-project.org/package=metaMix
diff --git a/debian/copyright b/debian/copyright
index 066f7e7..0578648 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -2,6 +2,7 @@ Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Names: metaMix
 Upstream-Contact: Sofia Morfopoulou <sofia.morfopoulou.10@ucl.ac.uk>
 Source: https://cran.r-project.org/package=metaMix
+Upstream-Name: metaMix
 
 Files: *
 Copyright: 2014-2015 Sofia Morfopoulou <sofia.morfopoulou.10@ucl.ac.uk>
diff --git a/debian/upstream/metadata b/debian/upstream/metadata
index 475e3c8..6fec932 100644
--- a/debian/upstream/metadata
+++ b/debian/upstream/metadata
@@ -1,6 +1,4 @@
 Archive: CRAN
-Contact: Sofia Morfopoulou <sofia.morfopoulou.10@ucl.ac.uk>
-Name: metaMix
 Reference:
   - Author: Sofia Morfopoulou and Vincent Plagnol
     Title: "Bayesian mixture analysis for metagenomic community profiling"

Debdiff

[The following lists of changes regard files as different if they have different names, permissions or owners.]

Files in second set of .debs but not in first

-rw-r--r--  root/root   /usr/lib/debug/.build-id/b2/013cc0405f44ac24ed21dcde266cde317c91d4.debug

Files in first set of .debs but not in second

-rw-r--r--  root/root   /usr/lib/debug/.build-id/2b/4d3fff2df603a0936bbdea64ab221e6c16f3a4.debug

Control files of package r-cran-metamix: lines which differ (wdiff format)

• Depends: r-base-core (>= 4.1.3.20220413-2~jan+lint1), 4.3.0-1~jan+lint2), r-api-4.0, r-cran-data.table (>= 1.9.2), r-cran-matrix, r-cran-gtools, r-cran-rmpi, r-cran-ggplot2, libc6 (>= 2.2.5), libstdc++6 (>= 4.3), libopenmpi-dev

Control files of package r-cran-metamix-dbgsym: lines which differ (wdiff format)

• Build-Ids: 2b4d3fff2df603a0936bbdea64ab221e6c16f3a4 b2013cc0405f44ac24ed21dcde266cde317c91d4

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