Lintian Fixes - toppic

Ready changes

Merge these changes:

git pull https://janitor.debian.net/git/toppic lintian-fixes/main

Summary

Diff

diff --git a/debian/changelog b/debian/changelog
index a70e9f4..1d3d0f6 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,11 @@
+toppic (1.3.0+dfsg1-5) UNRELEASED; urgency=medium
+
+  * Trim trailing whitespace.
+  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
+    Repository-Browse.
+
+ -- Debian Janitor <janitor@jelmer.uk>  Sun, 10 Jan 2021 15:50:18 -0000
+
 toppic (1.3.0+dfsg1-4) unstable; urgency=low
 
   * Fix the URLs for the VCS.
diff --git a/debian/control b/debian/control
index 2ddfce8..0b3bed2 100644
--- a/debian/control
+++ b/debian/control
@@ -35,7 +35,7 @@ Vcs-Git: https://salsa.debian.org/debichem-team/toppic.git
 
 Package: toppic
 Architecture: any
-Depends: ${shlibs:Depends}, 
+Depends: ${shlibs:Depends},
  ${misc:Depends},
  toppic-common (= ${source:Version})
 Description: Top-down proteoform identification and characterization (programs)
@@ -71,7 +71,7 @@ Description: Top-down proteoform identification and characterization (programs)
     identification. In addition, approximate spectrum-based filtering
     methods are employed for protein sequence filtering, and a Markov
     chain Monte Carlo method (TopMCMC) is used for estimating the
-    statistical significance of identifications.  
+    statistical significance of identifications.
  .
 	 -TopDiff (Top-down mass spectrometry-based identification of
     Differentially expressed proteoforms) compares the abundances of
@@ -123,7 +123,7 @@ Description: Top-down proteoform identification and characterization (common dat
     identification. In addition, approximate spectrum-based filtering
     methods are employed for protein sequence filtering, and a Markov
     chain Monte Carlo method (TopMCMC) is used for estimating the
-    statistical significance of identifications.  
+    statistical significance of identifications.
  .
 	 -TopDiff (Top-down mass spectrometry-based identification of
     Differentially expressed proteoforms) compares the abundances of
@@ -133,4 +133,3 @@ Description: Top-down proteoform identification and characterization (common dat
  .
  This package ships common data used by the various program in the
  toppic package.
-
diff --git a/debian/rules b/debian/rules
index a57d838..9340514 100755
--- a/debian/rules
+++ b/debian/rules
@@ -29,4 +29,3 @@ override_dh_auto_configure:
 	dh_auto_configure -- \
 		-DCMAKE_INSTALL_PREFIX="/usr" \
 		-DCMAKE_BUILD_TYPE=release
-
diff --git a/debian/upstream/metadata b/debian/upstream/metadata
new file mode 100644
index 0000000..8f495bd
--- /dev/null
+++ b/debian/upstream/metadata
@@ -0,0 +1,5 @@
+---
+Bug-Database: https://github.com/toppic-suite/toppic-suite/issues
+Bug-Submit: https://github.com/toppic-suite/toppic-suite/issues/new
+Repository: https://github.com/toppic-suite/toppic-suite.git
+Repository-Browse: https://github.com/toppic-suite/toppic-suite

Debdiff

[The following lists of changes regard files as different if they have different names, permissions or owners.]

Files in second set of .debs but not in first

-rw-r--r--  root/root   /usr/lib/debug/.build-id/07/d65d8cdd2531909c2b0793b9b4cae0f34cb3d1.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/35/0d9c7560b11c7483ba34a3d6eafa9783003963.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/7c/b0971e57ac27dca253c985780c39a2a181692c.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/94/864ec6ae8f62ef2dd46bc6e498ee287c8833c9.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/be/832398eee544ac18154d015668daf8b5d234b2.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/ec/0e7c1db2360bfd80e23102b6479c2b0d91eec3.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/fd/bec774da2b47ce00ecd9f064706be3cf4073f5.debug

Files in first set of .debs but not in second

-rw-r--r--  root/root   /usr/lib/debug/.build-id/09/b8662deeffa4a57be8604e3d0c164caf79a2cf.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/3d/128b3129986baf6453c5a388fd4fbcfac62d9c.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/56/5d16ace359413dd7f35fcd0dfcc2c5634cce2b.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/81/2ed0e7dc9c010e5dde0bbb797ddfeb960446f8.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/a5/d3e3a9ac1988661599c5ac1ffed767b269b35c.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/c4/261aa321e01dda8b89f3f6d4f9f8e79124b57f.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/ff/f22b53b57ae76923e5636c9f00090ea1873bcf.debug

No differences were encountered between the control files of package toppic

No differences were encountered between the control files of package toppic-common

Control files of package toppic-dbgsym: lines which differ (wdiff format)

  • Build-Ids: 09b8662deeffa4a57be8604e3d0c164caf79a2cf 3d128b3129986baf6453c5a388fd4fbcfac62d9c 565d16ace359413dd7f35fcd0dfcc2c5634cce2b 812ed0e7dc9c010e5dde0bbb797ddfeb960446f8 a5d3e3a9ac1988661599c5ac1ffed767b269b35c c4261aa321e01dda8b89f3f6d4f9f8e79124b57f fff22b53b57ae76923e5636c9f00090ea1873bcf 07d65d8cdd2531909c2b0793b9b4cae0f34cb3d1 350d9c7560b11c7483ba34a3d6eafa9783003963 7cb0971e57ac27dca253c985780c39a2a181692c 94864ec6ae8f62ef2dd46bc6e498ee287c8833c9 be832398eee544ac18154d015668daf8b5d234b2 ec0e7c1db2360bfd80e23102b6479c2b0d91eec3 fdbec774da2b47ce00ecd9f064706be3cf4073f5

Run locally

Try this locally (using the lintian-brush package):

debcheckout toppic
cd toppic
lintian-brush

More details

Full run details