Tree @4947dd4d-f367-4b85-a87a-d9534047c831/main (Download .tar.gz)
- ..
- aa2nonred.pl
- add_name_to_gff3.pl
- augustify.py
- augustus2browser.pl
- augustus2gbrowse.pl
- autoAug.pl
- autoAugPred.pl
- autoAugTrain.pl
- bamToWig.py
- bedgraph2wig.pl
- blat2gbrowse.pl
- blat2hints.pl
- block2prfl.pl
- cegma2gff.pl
- checkParamArchive.pl
- checkUTR
- cleanDOSfasta.pl
- clusterAndSplitGenes.pl
- compare_masking.pl
- computeFlankingRegion.pl
- createAugustusJoblist.pl
- del_from_prfl.pl
- eval_dualdecomp.pl
- eval_multi_gtf.pl
- evalCGP.pl
- executeTestCGP.py
- exonerate2hints.pl
- exoniphyDb2hints.pl
- extractAnno.py
- extractTranscriptEnds.pl
- filter-ppx.pl
- filterGenes.pl
- filterGenesIn.pl
- filterGenesIn_mRNAname.pl
- filterGenesOut_mRNAname.pl
- filterInFrameStopCodons.pl
- filterMaf.pl
- filterPSL.pl
- filterShrimp.pl
- filterSpliceHints.pl
- findGffNamesInFasta.pl
- fix_in_frame_stop_codon_genes.py
- fix_joingenes_gtf.pl
- gbrowse.conf
- gbrowseold2gff3.pl
- gbSmallDNA2gff.pl
- get_loci_from_gb.pl
- getAnnoFasta.pl
- getAnnoFastaFromJoingenes.py
- getLinesMatching.pl
- gff2gbSmallDNA.pl
- gff2ps_mycustom
- gffGetmRNA.pl
- gp2othergp.pl
- gtf2aa.pl
- gtf2bed.pl
- gtf2gff.pl
- gth2gtf.pl
- hal2maf_split.pl
- helpMod.pm
- join_aug_pred.pl
- join_mult_hints.pl
- joinPeptides.pl
- maf2conswig.pl
- makeMatchLists.pl
- makeUtrTrainingSet.pl
- maskNregions.pl
- merge_masking.pl
- moveParameters.pl
- msa2prfl.pl
- new_species.pl
- opt_init_and_term_probs.pl
- optimize_augustus.pl
- parseSim4Output.pl
- partition_gtf2gb.pl
- pasapolyA2hints.pl
- peptides2alternatives.pl
- peptides2hints.pl
- PF00225_full.blocks.txt
- PF00225_seed.blocks.txt
- phastconsDB2hints.pl
- polyA2hints.pl
- prints2prfl.pl
- pslMap.pl
- randomSplit.pl
- README.autoAug
- retroDB2hints.pl
- rmRedundantHints.pl
- runAllSim4.pl
- samMap.pl
- scipiogff2gff.pl
- setStopCodonFreqs.pl
- simpleFastaHeaders.pl
- simplifyFastaHeaders.pl
- SplicedAlignment.pm
- split_wiggle.pl
- splitMfasta.pl
- summarizeACGTcontent.pl
- transMap2hints.pl
- uniquePeptides.pl
- utrgff2gbrowse.pl
- webserver-results.head
- webserver-results.tail
- weedMaf.pl
- wig2hints.pl
- wigchoose.pl
- writeResultsPage.pl
- yaml2gff.1.4.pl
History of scripts @4947dd4d-f367-4b85-a87a-d9534047c831/main
- New upstream version 3.4.0+dfsg Steffen Moeller 3 years ago
- New upstream version 3.3.3+dfsg Sascha Steinbiss 4 years ago
- New upstream version 3.3.2+dfsg Sascha Steinbiss 5 years ago
- New upstream version 3.3.1+dfsg Sascha Steinbiss 6 years ago
- New upstream version 3.3+dfsg Sascha Steinbiss 6 years ago
- New upstream version 3.2.3+dfsg Sascha Steinbiss 7 years ago
- Imported Upstream version 3.2.2+dfsg Sascha Steinbiss 8 years ago
- Imported Upstream version 3.2.1+dfsg Sascha Steinbiss 8 years ago