makefile - baitfisher (debian/1.0+dfsg-1)

Tree @debian/1.0+dfsg-1 (Download .tar.gz)

CAligner
CFile
debian
Example
fast-dynamic-bitset
scoring-matrices
tclap
.DS_Store
bait-filter.cpp
bait-fisher-helper.cpp
bait-fisher-helper.h
bait-fisher.cpp
basic-DNA-RNA-AA-routines.h
CBaitRecord.h
CBlastParser.h
CDistance_matrix.h
CDnaString2.h
CHistogram.h
CRequiredTaxon.h
CSeqNameList.h
Csequence_cluster_and_center_sequence.cpp
Csequence_cluster_and_center_sequence.h
CSequence_Mol2_1.h
CSequences2.h
CSplit2.h
CTaxonNamesDictionary.h
Ctriple.h
DEBUG_STUFF.h
easystring.h
fast-realloc-vector.h
faststring2.h
GFF-class.h
GFF-collection.h
global-types-and-parameters.cpp
global-types-and-parameters.h
LICENSE.GPLv3.txt
LICENSE.md
LICENSE_AND_COPYRIGHT_as_found_in_each_source_file
makefile
makefile_win
mydir-unix.cpp
mydir-unix.h
primefactors.h
print_container.h
range_functions.h
README.md
simpledna_N0.mat
statistic_functions.h
typedefs.h

makefile @debian/1.0+dfsg-1 — raw · history · blame

CPP = g++
CPPFLAGS = -I . -O3

OBJECTS1 = bait-fisher-helper.o bait-fisher.o Csequence_cluster_and_center_sequence.o mydir-unix.o
OBJECTS2 = bait-filter.o global-types-and-parameters.o

%.o: %.cpp
	$(CPP) $(CPPFLAGS) -c $< -o $@

default: BaitFisher-v1.2.7 BaitFilter-v1.0.5

BaitFisher-v1.2.7: $(OBJECTS1)
	$(CPP) $(CPPFLAGS) -lstdc++ $(OBJECTS1) -o $@

BaitFilter-v1.0.5: $(OBJECTS2)
	$(CPP) $(CPPFLAGS) -lstdc++ $(OBJECTS2) -o $@

clean:
	rm -f *.o
	rm -f BaitFisher-v1.2.7
	rm -f BaitFilter-v1.0.5