Tree @debian/1.5.9+ds-3 (Download .tar.gz)
- ..
- add-copyright.sh
- add_revcmp.rb
- all-vs-all.sh
- alloutputoptions.rb
- appendsuffix.rb
- ascQorder.rb
- blast2gff.rb
- blat2gff3
- build_dists.sh
- build_windows.sh
- calcmonosize.rb
- callrununique.sh
- calltestcase.sh
- check_api_includes
- check_core_includes
- checkchains.rb
- checklcp.sh
- checkmaxpairs.sh
- checktallymer.sh
- checkunique.sh
- class_gen.rb
- class_implement.rb
- cleanpp.sh
- cmp-seedmatches.rb
- cmp-seex-bench.rb
- cmp-seex-iter.rb
- cmp-seex.rb
- cmp_db_query_exch.rb
- cmpdbfile.sh
- cmplcpintervals.sh
- code_templates.rb
- codegen
- codegen_module.rb
- collect-mappings.rb
- comparesfx.sh
- condenseq_blastsearch_stats.rb
- condenseq_hmmsearch_stats.rb
- convert2myersformat.rb
- coverage-MEM.rb
- create_amalgamation
- create_html
- create_manpages
- ctags.sh
- diff-cover.rb
- do.sh
- dos2unix
- DW-pre-commit
- dwmake.rb
- encodesql2gff3
- enumseqfiles.sh
- esa-compressed.sh
- esa-sfxthreaded.sh
- esq-in-bytes.sh
- evalseedhash.rb
- expand_license
- extract-seqs.sh
- failure.sh
- findfasta.rb
- fmt_embl.rb
- fmt_gbk.rb
- gc-parse.rb
- gdb-stack.sh
- gen-esa-bottomup.rb
- gen-esa-bottomup.sh
- gen-intsets.rb
- gen-radixsort-ip.rb
- gen-radixsort-ip.sh
- gen-randseq.rb
- gen_zsh_completion.rb
- generate_hmmer_squid_h
- generate_hmmer_squidconf_h
- genlengthsorted.rb
- genomediff.rb
- genswtest.sh
- gff3.rb
- gff3tidy_all
- gmap2gff3
- gprof-run.sh
- gtgrep.sh
- gthclean.sh
- gthcleanrec.sh
- help2comp.py
- hop.sh
- incl.sed
- iterate_unit_tests.sh
- iterrunmerge.sh
- itershulength.sh
- itertestcases.sh
- lcpintervals.rb
- line_ranking.rb
- ltrtest.sh
- make_debug.sh
- make_testdata_encseqs.sh
- make_with_cairo.sh
- makeprimetable.sh
- maketags.sh
- maketexps.sh
- match-stat.rb
- matched-seqpairs.rb
- mkesa-fmt.rb
- mksainseq.rb
- mksimreads.sh
- mkswapbits.rb
- mktexoptstable.rb
- mktirs.lua
- pack-trembl.sh
- packed-argest.lhs
- pairsums.sh
- parse_massif.rb
- pre-commit
- prepend_all
- queries.sh
- randlines.rb
- rdj-checkcontigs.rb
- rdj-parsetranscript.rb
- rdj-runbenchmark.sh
- rdj-spacepeak.sh
- renamer.rb
- repfind-change.rb
- repfind-cmp.rb
- repfvsrepf.sh
- report2fasta
- reset_fasta_ids.rb
- result2best.rb
- rf2of.rb
- rmwildcard.rb
- run-se-da.sh
- run2tex.rb
- run_genomediff.rb
- run_shu_esa_pck.rb
- runetags.sh
- runfirstcodes.sh
- rungfm.sh
- runmaxpairs.sh
- runmerge.sh
- runmkesa-sfx.sh
- runmkfm.sh
- runmkfm_dw.sh
- runpckdfs.sh
- rununique-test.sh
- rununique.sh
- sample_encseq.lua
- sarr-trembl.sh
- sed_all
- seex-best-pair.rb
- seex-cmp-repfind.rb
- sensitivity-test.rb
- seqselect.rb
- sfx-big.sh
- shulength.sh
- sim-read-mapping.sh
- skclean.sh
- sketchtest.sh
- skmake.rb
- skmemtest.sh
- sktest-match.sh
- sktest.sh
- skyline.rb
- sortmaxdepth.sh
- splitmultifasta.rb
- spmcheck.sh
- spmfilter.rb
- spmop.sh
- src_check
- src_check_header.rb
- src_clean
- Suffixerator-calls.rb
- Suffixerator-table.rb
- tar_root.sh
- template2c.pl
- tr2deskeys.rb
- travis_test.rb
- unix2dos
- Vagrantfile
- vmnameclash.sh
- weed-stale-objects.sh