2015-05-27 warnes
* [r2039] R/mixedsort.R, man/mixedsort.Rd: Add roman numeral
support to mixedorder() and mixedsort().
* [r2037] man/asc.Rd: Add asc() and chr() functions for converting
between characters and ASCII codes
* [r2036] R/roman2int.R: roman2int() now returns NA for invalid
roman numeral strings instead of generating an error.
* [r2035] NAMESPACE: Add asc(), chr(), assignEdgewise(),
unByteCode(), and
unByteCodeAssign() to package NAMESPACE.
* [r2034] R/asc.R: Add asc() and chr() functions for converting
between characters and ASCII codes
2015-05-26 warnes
* [r2030] inst/ChangeLog: Add changelog to svn repository
2015-05-25 warnes
* [r2029] tests/test_ddirichlet.R: Add library call.
* [r2028] man/unByteCode.Rd: Fix typo and add documentation for
argument 'name'.
* [r2027] man/mixedsort.Rd: Fix typo.
* [r2026] man/mixedsort.Rd: Add description of blanklast argument,
fix typo.
* [r2025] man/quantcut.Rd: Change usage to match actual definition.
* [r2024] man/mixedsort.Rd: Note characters sorting ignores case.
* [r2023] man/mixedsort.Rd: Remove '...' from arglist to match
source code.
* [r2022] man/mixedsort.Rd: Replace unicode quotes with \code{..}.
2015-05-23 warnes
* [r2021] tests/test_ddirichlet.R: Add regression test ddirichlet()
bug for x[i]=0, alpha[i]=1:
ddirichlet(x, alpha) was returning NA rather than 0.
* [r2020] R/dirichlet.R: ddirichlet() was incorrectly returning NA
when x[i]=0 and
alpha[i]=1. In this case, the one calculation became (-Inf * 0),
which R evaluates to NaN. The correction is to detect this case
and
substitute -Inf instead of NaN.
2015-05-08 warnes
* [r2019] R/mixedsort.R: Summary: Speed up mixedorder by moving
suppressWarnings outside of
lapply loops. (Suggestion by Henrik Bengtsson.)
2015-05-02 warnes
* [r2018] Rename 'trunk' to 'pkg' for compatibility with R-forge
* [r2017] Minor layout change.
* [r2016] Remove stray 'svn' that was inserted into the code.
* [r2015] Add man page for unByteCode(), assignEdgeWise(), and
unByteCodeAssign()
2015-04-28 warnes
* [r1976] Changes to mixedsort():
- Hands off objects that are not character vectors to the default
sort.
- Add 'decreasing', 'na.last', and 'blank.last' arguments.
* [r1975] Add private function 'checkReverseDependencies'.
2015-04-23 warnes
* [r1950] Update NEWS and ChangeLog
* [r1949] - The 'q' argument to quantcut()'s 'q' now accept an
integer
indicating the number of equally spaced quantile groups to
create. (Suggestion and patch submitted by Ryan C. Thompson.)
* [r1946] Revers accidental text deletion:
* [r1945] Update for gtools 3.4.3
* [r1944] Remove debugging code and stray browser() call
2015-04-14 warnes
* [r1923] Fix typo
2015-04-09 warnes
* [r1921] Update gtools ChangeLog
* [r1920] Move first()/last()/left()/right() to gdata.
Add new functions na.replace() and loadedPackages().
Add more text to package description.
2015-04-08 warnes
* [r1919] Move first/last/left/right to from gtools to gdata
2015-04-06 warnes
* [r1918] Correct URL
* [r1917] Update NEWS and ChangeLog for gtools 3.5.0
* [r1916] Add ChangeLog files to repository
* [r1915] Implement fix to keywords() needed for R-3.4.1, as
suggested by Kurt
Hornik.
* [r1914] - Export S3 methods for first(), last(), left() and
right().
- Ensure code matches man page for first(), last(), left(), and
right().
2014-10-09 warnes
* [r1897] Update for 3.5.0 release of gtools
* [r1896] Make right() and left() S3 methods for classes data.frame
and matrix
2014-08-27 warnes
* [r1872] Fix man page
* [r1871] Finish adding first(), last(), left(), and right().
* [r1870] Add functions first(), last(), left(), and right().
2014-05-28 warnes
* [r1816] Update for gtools 3.4.1
* [r1815] Add test to ensure smartbind() properly handles Date
columns.
* [r1814] smartbind: Convert non-native type columns (except
factor) to character.
2014-04-18 arnima
* [r1813] Main arg is 'x' like showNonASCII(x), preformatted notes
instead of verb
2014-04-17 warnes
* [r1810] Update ASCIIfy man page to match source code and add
keywords
* [r1809] Update NEWS for gtools 3.4.0
* [r1808] Add ASCIIfy function posted to RDevel by Arni Magnusson
2014-03-01 warnes
* [r1776] Fix cut-and-paste error.
* [r1775] Update files for gtools 3.3.1 release
* [r1774] Fix bug in gtools::mixedorder regular expression for
regognizing numbers. (Periods weren't escaped).
2014-02-11 warnes
* [r1773] Create and use locate copy of tools:::.split_op_version.
* [r1772] Update for gtools 3.3.0.
* [r1771] Fix arguments
* [r1770] Update arguments to match code.
* [r1769] Add getDependencies() function to return a list of
package dependencies.
2014-01-14 warnes
* [r1768] Update for bug-fix release
* [r1767] Add test file for binsearch() function.
* [r1766] Fixed bug where binsearch() returned the wrong endpoint &
value when the found value was at the upper endpoint.
2014-01-13 warnes
* [r1765] Fix typo
2014-01-11 warnes
* [r1764] Update for gtools release 3.2.0
* [r1763] fixes for R CMD check
* [r1762] Fixes for gtools release 3.2.0
2013-12-23 warnes
* [r1761] Extend the keywords() function to return keywords
associated with a specified topic via 'keywords(topic)'.
* [r1760] Add keyword.
* [r1759] Add stars.pval() function to convert p-values into
significance symbols.
2013-11-26 warnes
* [r1748] mixedorder() was failing to correctly handle numbers
including
decimals due to a faulty regular expression. Prior to the fix:
> drr
[1] "Dose 0.3 mg" "Dose 0.04 mg" "Dose 0.5 mg"
> gtools::mixedsort(drr)
[1] "Dose 0.3 mg" "Dose 0.04 mg" "Dose 0.5 mg"
After the fix:
> drr
[1] "Dose 0.3 mg" "Dose 0.04 mg" "Dose 0.5 mg"
> mixedsort(drr)
[1] "Dose 0.04 mg" "Dose 0.3 mg" "Dose 0.5 mg"
In addition, an optimization was added that checked if the input
vector
was numeric. If so, simply use the existing base::order function.
2013-11-18 warnes
* [r1747] Use ".Deprecated" instead of warning.
2013-11-06 warnes
* [r1746] Update files for gtools 3.1.1
* [r1745] Fix problem with mixedorder/mixedsort when there is only
zero or one elements in the vector.
2013-09-23 warnes
* [r1716] Comment out empty sections in gtools-deprecated.Rd
* [r1715] Update files for gtools 3.1.0 release
* [r1714] Make 'addLast()' defunct.
* [r1713] Mark 'addLast()' as defunct and move 'lastAdd()' function
to a separate file.
* [r1712] Update for gtools 3.0.1 release
* [r1711] Use 'suppressWarnings() instead of 'options(warn=-1)' in
'mixedorder()'.
2013-07-07 warnes
* [r1705] Fix typo.
2013-07-06 warnes
* [r1704] Fix Rd warning.
* [r1703] Include lastAdd in NAMESPACE
* [r1702] Change assert from deprecated to defunct.
* [r1701] Improve deprecation message
* [r1700] Update for gtools 3.0.0
* [r1699] Create new function lastAdd to replace addLast and mark
addLast as deprecated.
2013-07-05 warnes
* [r1698] Point out that addLast() modifies the value of .Last in
the global environment.
* [r1697] Point out that addLast() modifies the value of .Last in
the global environment.
* [r1696] Update for gtools 2.7.2 mark 2
* [r1695] Remove cross-reference to (obsolete?) moc package
* [r1694] Update for gtools 2.7.2
* [r1693] Update for R version 3.0.0 and later
2013-03-17 warnes
* [r1640] Fix error in smartbind: factor levels were not being
handled if the factor column was not present in the first data
frame.
2012-06-19 warnes
* [r1570] Update for gtools 2.7.0.
* [r1569] Document new 'verbose' argument to smartbind().
* [r1568] Clean up R CMD check warnings.
2012-05-04 warnes
* [r1529] smartbind(): Improve handling of factors and ordered
factors.
2011-10-05 warnes
* [r1518] Update version number for release
* [r1517] Add 'sep' argument to smartbind() to allow specification
of character used to separate components of constructed names
2011-09-28 warnes
* [r1513] smartbind(): Prevent coersion to data frame from mangling
column names.
* [r1512] Add 'fill' argument to smartbind() to specify a value to
use for
missing entries.
* [r1511] Add 'fill' argument to smartbind() to specify a value to
use for
missing entries.
2010-08-14 warnes
* [r1451] Modify mixedorder()/mixedsort() to better handle strings
containing multiple periods, like version numbers (e.g 1.1.2,
1.2.1. 1.1.1.1).
2010-05-01 warnes
* [r1434] Update version number for new release
* [r1433] Change Greg's email address to greg@warnes.net
* [r1432] Fix error in checkRVersion()
2010-04-28 ggrothendieck2
* [r1431] fixed problems with R CMD CHECK
2009-05-09 warnes
* [r1328] Escape $ in .Rd file to avoid latex issues
* [r1327] Update NEWS and create softlinks for NEWS and ChangeLog
in top level directory
* [r1326] Move actual NEWS file into inst.
* [r1325] Update Greg's email address and fix Rd syntax errors
2009-02-16 warnes
* [r1313] Correct windows make flags as suggested by Brian Ripley.
2008-08-15 warnes
* [r1303] Add keywords() function to show /doc/KEYWORDS file
2008-05-29 warnes
* [r1285] Add newVersionAvailable() function to compare running and
latest available R versions
2008-05-26 warnes
* [r1284] Update license specification
* [r1283] Remove 'assert' man page
2008-05-22 warnes
* [r1282] Finish rename of assert.R to assert-depricated.Rd
* [r1281] Add checkRVersion.R file
* [r1280] Rename again to get correct extension!
* [r1279] Update NEWS for 2.5.0
* [r1278] Add man page for checkRVersion
* [r1277] Rename assert-deprecated.R to assert.R to meet R file
name requirements.
* [r1276] Add checkRVersion to NAMESPACE, and increment version in
DESCRIPTION.
* [r1275] Remove broken SEE LSO reference
2008-04-12 warnes
* [r1259] Improve text explanation of how defmacro() and strmacro()
differ from
function().
* [r1258] assert() is now deprecated in favor of base::stopifnot()
* [r1257] Rename 'assert.R' to 'deprecated.R'.
* [r1256] Assert is now deprecated in favor of base::stopifnot(),
so add call to
.Deprecated() to inform the user.
2007-11-30 warnes
* [r1228] Update defnitions of odd() and even() to use modulus
operator instead of division. Prettier, I think, :-D
2007-08-08 warnes
* [r1121] Fix bug identified by R-2.6's check routings in
binsearch()
* [r1120] Add the binsearch(), previously in the genetics package.
2007-07-18 ggorjan
* [r1100] typo fixed
2007-04-12 warnes
* [r1088] Add ask() function to prompt the user and collect a
single response.
2007-04-07 warnes
* [r1087] Fix improper escapes in regexp detected by R 2.5.0
package check.
2007-03-23 warnes
* [r1083] Allow permutations for r>n provided repeats.allowed=TRUE
2006-11-28 warnes
* [r1023] Replace F with FALSE in smartbind example.
2006-11-27 warnes
* [r1022] Replace T with TRUE in smartbind example
* [r1021] Temprary remove to reset binary flag
* [r1020] Temprary remove to reset binary flag
* [r1019] Add smartbind() to list of exported functions, and add
corresponding
documentation file.
* [r1018] Update my email address
2006-11-14 ggorjan
* [r1012] Removed executable property
2006-08-02 warnes
* [r977] Update my email address
2006-05-05 nj7w
* [r958] Fixed minor typo - in {value} - n was replaced by r
* [r957] Fixed minor typos
2006-03-01 warnes
* [r903] Add smartbind function
2006-01-18 warnes
* [r845] Add concept tags to make mixedsort easier to locate.
2005-12-21 warnes
* [r837] Update version number and date
* [r836] Note changes for 2.2.3
* [r835] Should now work on Windows
2005-12-20 warnes
* [r834] Temporary fix to allow setTCPNoDelay.c to compile on
Windows. If compiled on windows calling setTCPNoDelay will just
raise an error.
2005-12-14 warnes
* [r813] Change C++ comment to standard comment
2005-12-13 nj7w
* [r810] *** empty log message ***
* [r809] Updated NEWS and removed ChangeLog
2005-12-12 nj7w
* [r800] Updated version for CRAN release
2005-12-08 warnes
* [r790] Add C source code for setTCPNoDelay.
2005-12-01 nj7w
* [r776] Updated Greg's email address
2005-11-29 warnes
* [r769] Add UseDynLib to NAMESPACE so the shared library gets
properly loaded.
* [r768] - Remove debugging comments
- Change return value on success to "Success".
2005-11-22 warnes
* [r758] NAMESPACE
* [r757] Update news for 2.2.1 release.
* [r756] Fixes for R CMD check
* [r755] Add setTCPNoDelay() function and documentation
* [r745] New function 'addLast' that adds functions to R's .Last()
so that
they will be executed when R is terminating.
2005-09-22 warnes
* [r678] More changes for strmacro(), also changes for 2.1.1
release
* [r677] Add strmaco() which defines functions that use strings for
macro definition
2005-09-21 warnes
* [r676] Add support for DOTS/... arguments to defmacro
2005-09-12 nj7w
* [r671] Updated Greg's email
2005-09-02 nj7w
* [r653] Exported assert
* [r652] Updated the version number
* [r651] Added NEWS
* [r650] Added ChangeLog
* [r649] Fixed syntax errors
2005-09-02 warnes
* [r648] Add assert() and documentation
* [r647] Fix problem in defmacro.Rd file: don't use \code{} in the
example section.
2005-08-31 warnes
* [r645] Adding the defmacro() function, extracted from
Lumley T. "Programmer's Niche: Macros in {R}", R News, 2001, Vol
1,
No. 3, pp 11--13, \url{http://CRAN.R-project.org/doc/Rnews/}
* [r642] Add stand-alone DESCRIPTION file and remove old
DESCRIPTION.in file.
2005-06-13 nj7w
* [r626] Fixed a bug in mixedsort - check if "which.na" and
"which.blank" is numeric(0) before subsetting the datasets.
2005-06-09 nj7w
* [r625] Updating the version number, and various help files to
synchronize splitting of gregmisc bundle in 4 individual
components.
2005-05-10 warnes
* [r619] Fix handling of NA's in mixedorder. We were using a high
UTF character to try
to put NA's at the end of the sort order, but R 2.1.0 checks if
characters
are in the correct range. Instead, we explicitly force NA's to
the end.
2005-04-07 warnes
* [r606] - Add scat() function which writes its arguments to stderr
and
flushes so that output is immediately displayed, but only if
'getOption("DEBUG")' is true.
2005-04-02 warnes
* [r600] Move drop.levels() from gtools to gdata.
* [r599] Minor reordering of functions in file
* [r598] Move frameApply() to gdata package.
* [r597] Fix error if only one value passed to mixedorder.
* [r596] Add proper handling where more than one quantile obtains
the same value
2005-04-01 warnes
* [r595] Add CVS ID tag to file headers.
* [r594] Fixes from Jim Rogers for R CMD check problems in
frameApply
2005-03-31 warnes
* [r591] Updates to drop.levels() and frameApply() from Jim Rogers
* [r590] Add ELISA data set used by frameApply and drop.levels
examples
2005-02-25 warnes
* [r562] Replace 'T' with TRUE.
* [r561] Remove dependency on ELISA data set for the example.
* [r558] Add drop.levels, frameApply to namespace export.
2005-02-15 warnes
* [r542] Add frameApply and drop.levels contributed by Jim Rogers.
2005-01-12 warnes
* [r515] Add dependency on R 1.9.0+ to prevent poeple from
installing on old
versions of R which don't support namespaces.
2004-09-27 warneg
* [r461] Updated to pass R CMD check.
2004-09-03 warneg
* [r446] initial bundle checkin
2004-09-02 warneg
* [r442] Initial revision
2004-08-27 warnes
* [r441] Fixed bug in mixedsort, and modified reorder.factor to use
mixedsort.
2004-08-26 warnes
* [r440] - Fix bug pointed out by Jim Rogers.
- Use a more distictive internal separator: $@$ instead of just $
- Capitalization is now irrelevent for search order (unlike
ASCII).
2004-06-08 warnes
* [r372] Nitin Jain added by= parameter to allow specifying
separation between groups.
2004-05-26 warnes
* [r345] Escape underscores in email addresses so Latex is happy.
* [r343] Replace 'T' with 'TRUE' to pass R CMD check.
2004-05-25 warnes
* [r334] Remove extraneous comments.
* [r333] Fix an error in the code when using repeats.allow=T and
r>2. Bug
report and fix both due to Elizabeth Purdom
<epurdom@stanford.edu>.
2004-05-24 warnes
* [r323] Check if argument is a vector before doing is.na to avoid
generating a warning.
* [r322] Add invalid() function for testing if a parameter value is
non-missing, non-NA,
non-NULL.
2004-04-27 warnes
* [r321] Replaced argument `as.list' with `simplify'. Updated
documentation,
and updated examples appropriately.
2004-04-26 warnes
* [r320] Added as.list argument to return one list element per
evaluation.
2004-03-26 warnes
* [r303] Uncomment and fix large 'n' example.
* [r301] - Update to match changes in running()
- Add examples to illustrate new arguments.
- Modify running correlation plot example to be more clear.
* [r299] More of the same.
* [r297] Fix bug discovered by Sean Davis <sdavis2@mail.nih.gov>.
The running
function took an improper shortcut. When allow.fewer=FALSE it was
still passing shorter lists of elements to the called function,
and
then overwriting the results for the shorter lists with NAs. The
code
now skips evaluation of the function on lists shorter than the
specified length when allow.fewer=FALSE.
2004-01-21 warnes
* [r277] - Mark sprint() as depreciated.
- Replace references to sprint with capture.output()
- Use match.arg for halign and valign arguments to
textplot.default.
- Fix textplot.character so that a vector of characters is
properly
displayed. Previouslt, character vectors were plotted on top of
each
other.
2003-12-03 warnes
* [r253] - match function argument defaults with 'usage'
2003-11-21 warnes
* [r237] Removed 'deqn' call that was confusing things.
* [r234] Add email address to author field
* [r233] - new files
* [r232] - Change 'T' to 'TRUE' in mixedsort.R
- Add missing brace in mixedsort.Rd
2003-11-20 warnes
* [r230] - Move 'odd' and 'even' functions to a separate file &
provide documentation
2003-11-18 warnes
* [r227] - Renamed smartsort to mixedsort and added documentation.
2003-11-10 warnes
* [r220] - Add files contributed by Arni Magnusson
<arnima@u.washington.edu>. As well as some of my own.
2003-05-23 warnes
* [r196] - library() backported from 1.7-devel. This version of the
function
adds the "pos=" argument to specify where in the search path the
library should be placed.
- updated .First.lib to use library(...pos=3) for MASS to avoid
the
'genotype' data set in MASS from masking the genotype funciton in
genetics when it loads gregmisc
- Added logit() inv.logit() matchcols() function and
corresponding docs
2003-04-22 warnes
* [r189] - Fixed tpyo in example that allowed combinations(500,2)
to run when
it should have been ignred for testing..
2003-04-10 warnes
* [r186] - Added note about the need to increase
options("expressions") to use
large values for 'n'. Prompted by bug report from Huan Huang
<huan.huang@bnpparibas.com
2003-04-04 warnes
* [r183] - Replace 'T' with 'TRUE'
* [r182] - Change occurences of 'T' to 'TRUE'
* [r181] - Allow optional arguments to sprint to be passed to print
- Fix R CMD check errors
* [r180] - Allow optional arguments to sprint to be passed to print
2003-04-03 warnes
* [r177] - Had mistyped 'sprint' as 'sprintf'.
* [r176] - Add help file for capture and sprintf.
2003-04-02 warnes
* [r174] - Added file 'capture.R' containing capture() and
sprint().
2003-03-07 warnes
* [r168] - Minor changes to code to allow the package to be
provided as an
S-Plus chapter.
2003-01-30 warnes
* [r161] - Fixed typo in email address.
2003-01-02 warnes
* [r148] - Add nlevels function.
2002-10-11 warnes
* [r133] - Add permute() function (wraper for sample) and man page
* [r132] - Escaped underscores in my email address that was causing
a parse
error in the {r,p}dirichlet man page.
2002-09-30 warnes
* [r128] - Added rdirichlet() and ddirichlet() with accompaning
help page and tests.
2002-09-24 warnes
* [r122] - Fixed error where running was always calling running2
with
'fun=mean', ignoring the specified funtion.
2002-09-23 warnes
* [r117] - Modified all files to include CVS Id and Log tags.
* [r116] - Added CrossTable() and barplot2() code and docs
contributed by Marc Schwartz.
- Permit combinations() to be used when r>n provided
repeat.allowed=TRUE
- Bumped up version number
2002-08-01 warnes
* [r114] - Corrected documentation mismatch for ci, ci.default.
- Replaced all occurences of '_' for assignment with '<-'.
- Replaced all occurences of 'T' or 'F' for 'TRUE' and 'FALSE'
with
the spelled out version.
- Updaded version number and date.
2002-04-09 warneg
* [r109] Checkin for version 0.5.3
2002-03-26 warneg
* [r97] Initial Checkin
* [r96] Initial checkin.
2002-03-20 warneg
* [r91] - Added definition of is.R function.
- Added boxplot.formula
2002-03-07 warneg
* [r90] - Added documentation and example for running2
* [r89] - Added "running2", which handles both univariate and
bivariate cases
- Modified "running" to call "running2"
2002-02-05 warneg
* [r75] - Fix typo that caused code meant to run only under S-Plus
to run
under R, causing problems.
2001-12-19 warneg
* [r67] - Added code for %in%.
2001-09-18 warneg
* [r18] Release 0.3.2
2001-09-01 warneg
* [r17] Initial checkin.
* [r16] Release 0.3.0
2001-08-25 warneg
* [r13] Initial CVS checkin.
* [r11] Fixed a typo and a syntax error.
* [r7] Initial Checkin
2001-06-29 warneg
* [r6] Initial revision.