Tree @debian/0_20140415.git42bb280-2 (Download .tar.gz)

• ..
• 2001
• 99
• Eqs
• JPG
• PDF
• Scripts
• USER
• angle_charmm.html
• angle_charmm.txt
• angle_class2.html
• angle_class2.txt
• angle_coeff.html
• angle_coeff.txt
• angle_cosine.html
• angle_cosine.txt
• angle_cosine_delta.html
• angle_cosine_delta.txt
• angle_cosine_periodic.html
• angle_cosine_periodic.txt
• angle_cosine_shift.html
• angle_cosine_shift.txt
• angle_cosine_shift_exp.html
• angle_cosine_shift_exp.txt
• angle_cosine_squared.html
• angle_cosine_squared.txt
• angle_dipole.html
• angle_dipole.txt
• angle_fourier.html
• angle_fourier.txt
• angle_fourier_simple.html
• angle_fourier_simple.txt
• angle_harmonic.html
• angle_harmonic.txt
• angle_hybrid.html
• angle_hybrid.txt
• angle_none.html
• angle_none.txt
• angle_quartic.html
• angle_quartic.txt
• angle_sdk.html
• angle_sdk.txt
• angle_style.html
• angle_style.txt
• angle_table.html
• angle_table.txt
• atom_modify.html
• atom_modify.txt
• atom_style.html
• atom_style.txt
• balance.html
• balance.txt
• body.html
• body.txt
• bond_class2.html
• bond_class2.txt
• bond_coeff.html
• bond_coeff.txt
• bond_fene.html
• bond_fene.txt
• bond_fene_expand.html
• bond_fene_expand.txt
• bond_harmonic.html
• bond_harmonic.txt
• bond_harmonic_shift.html
• bond_harmonic_shift.txt
• bond_harmonic_shift_cut.html
• bond_harmonic_shift_cut.txt
• bond_hybrid.html
• bond_hybrid.txt
• bond_morse.html
• bond_morse.txt
• bond_none.html
• bond_none.txt
• bond_nonlinear.html
• bond_nonlinear.txt
• bond_quartic.html
• bond_quartic.txt
• bond_style.html
• bond_style.txt
• bond_table.html
• bond_table.txt
• boundary.html
• boundary.txt
• box.html
• box.txt
• change_box.html
• change_box.txt
• clear.html
• clear.txt
• communicate.html
• communicate.txt
• compute.html
• compute.txt
• compute_ackland_atom.html
• compute_ackland_atom.txt
• compute_angle_local.html
• compute_angle_local.txt
• compute_atom_molecule.html
• compute_atom_molecule.txt
• compute_basal_atom.html
• compute_basal_atom.txt
• compute_body_local.html
• compute_body_local.txt
• compute_bond_local.html
• compute_bond_local.txt
• compute_centro_atom.html
• compute_centro_atom.txt
• compute_cluster_atom.html
• compute_cluster_atom.txt
• compute_cna_atom.html
• compute_cna_atom.txt
• compute_com.html
• compute_com.txt
• compute_com_molecule.html
• compute_com_molecule.txt
• compute_contact_atom.html
• compute_contact_atom.txt
• compute_coord_atom.html
• compute_coord_atom.txt
• compute_damage_atom.html
• compute_damage_atom.txt
• compute_dihedral_local.html
• compute_dihedral_local.txt
• compute_dilatation_atom.html
• compute_dilatation_atom.txt
• compute_displace_atom.html
• compute_displace_atom.txt
• compute_erotate_asphere.html
• compute_erotate_asphere.txt
• compute_erotate_rigid.html
• compute_erotate_rigid.txt
• compute_erotate_sphere.html
• compute_erotate_sphere.txt
• compute_erotate_sphere_atom.html
• compute_erotate_sphere_atom.txt
• compute_event_displace.html
• compute_event_displace.txt
• compute_group_group.html
• compute_group_group.txt
• compute_gyration.html
• compute_gyration.txt
• compute_gyration_molecule.html
• compute_gyration_molecule.txt
• compute_heat_flux.html
• compute_heat_flux.txt
• compute_improper_local.html
• compute_improper_local.txt
• compute_inertia_molecule.html
• compute_inertia_molecule.txt
• compute_ke.html
• compute_ke.txt
• compute_ke_atom.html
• compute_ke_atom.txt
• compute_ke_atom_eff.html
• compute_ke_atom_eff.txt
• compute_ke_eff.html
• compute_ke_eff.txt
• compute_ke_rigid.html
• compute_ke_rigid.txt
• compute_meso_e_atom.html
• compute_meso_e_atom.txt
• compute_meso_rho_atom.html
• compute_meso_rho_atom.txt
• compute_meso_t_atom.html
• compute_meso_t_atom.txt
• compute_modify.html
• compute_modify.txt
• compute_msd.html
• compute_msd.txt
• compute_msd_molecule.html
• compute_msd_molecule.txt
• compute_msd_nongauss.html
• compute_msd_nongauss.txt
• compute_pair.html
• compute_pair.txt
• compute_pair_local.html
• compute_pair_local.txt
• compute_pe.html
• compute_pe.txt
• compute_pe_atom.html
• compute_pe_atom.txt
• compute_plasticity_atom.html
• compute_plasticity_atom.txt
• compute_pressure.html
• compute_pressure.txt
• compute_property_atom.html
• compute_property_atom.txt
• compute_property_local.html
• compute_property_local.txt
• compute_property_molecule.html
• compute_property_molecule.txt
• compute_rdf.html
• compute_rdf.txt
• compute_reduce.html
• compute_reduce.txt
• compute_slice.html
• compute_slice.txt
• compute_stress_atom.html
• compute_stress_atom.txt
• compute_temp.html
• compute_temp.txt
• compute_temp_asphere.html
• compute_temp_asphere.txt
• compute_temp_com.html
• compute_temp_com.txt
• compute_temp_deform.html
• compute_temp_deform.txt
• compute_temp_deform_eff.html
• compute_temp_deform_eff.txt
• compute_temp_eff.html
• compute_temp_eff.txt
• compute_temp_partial.html
• compute_temp_partial.txt
• compute_temp_profile.html
• compute_temp_profile.txt
• compute_temp_ramp.html
• compute_temp_ramp.txt
• compute_temp_region.html
• compute_temp_region.txt
• compute_temp_region_eff.html
• compute_temp_region_eff.txt
• compute_temp_rotate.html
• compute_temp_rotate.txt
• compute_temp_sphere.html
• compute_temp_sphere.txt
• compute_ti.html
• compute_ti.txt
• compute_vacf.html
• compute_vacf.txt
• compute_voronoi_atom.html
• compute_voronoi_atom.txt
• create_atoms.html
• create_atoms.txt
• create_box.html
• create_box.txt
• delete_atoms.html
• delete_atoms.txt
• delete_bonds.html
• delete_bonds.txt
• Developer.pdf
• dielectric.html
• dielectric.txt
• dihedral_charmm.html
• dihedral_charmm.txt
• dihedral_class2.html
• dihedral_class2.txt
• dihedral_coeff.html
• dihedral_coeff.txt
• dihedral_cosine_shift_exp.html
• dihedral_cosine_shift_exp.txt
• dihedral_fourier.html
• dihedral_fourier.txt
• dihedral_harmonic.html
• dihedral_harmonic.txt
• dihedral_helix.html
• dihedral_helix.txt
• dihedral_hybrid.html
• dihedral_hybrid.txt
• dihedral_multi_harmonic.html
• dihedral_multi_harmonic.txt
• dihedral_nharmonic.html
• dihedral_nharmonic.txt
• dihedral_none.html
• dihedral_none.txt
• dihedral_opls.html
• dihedral_opls.txt
• dihedral_quadratic.html
• dihedral_quadratic.txt
• dihedral_style.html
• dihedral_style.txt
• dihedral_table.html
• dihedral_table.txt
• dimension.html
• dimension.txt
• displace_atoms.html
• displace_atoms.txt
• dump.html
• dump.txt
• dump_image.html
• dump_image.txt
• dump_modify.html
• dump_modify.txt
• dump_molfile.html
• dump_molfile.txt
• echo.html
• echo.txt
• fix.html
• fix.txt
• fix_adapt.html
• fix_adapt.txt
• fix_addforce.html
• fix_addforce.txt
• fix_addtorque.html
• fix_addtorque.txt
• fix_append_atoms.html
• fix_append_atoms.txt
• fix_atc.html
• fix_atc.txt
• fix_ave_atom.html
• fix_ave_atom.txt
• fix_ave_correlate.html
• fix_ave_correlate.txt
• fix_ave_histo.html
• fix_ave_histo.txt
• fix_ave_spatial.html
• fix_ave_spatial.txt
• fix_ave_time.html
• fix_ave_time.txt
• fix_aveforce.html
• fix_aveforce.txt
• fix_balance.html
• fix_balance.txt
• fix_bond_break.html
• fix_bond_break.txt
• fix_bond_create.html
• fix_bond_create.txt
• fix_bond_swap.html
• fix_bond_swap.txt
• fix_box_relax.html
• fix_box_relax.txt
• fix_colvars.html
• fix_colvars.txt
• fix_deform.html
• fix_deform.txt
• fix_deposit.html
• fix_deposit.txt
• fix_drag.html
• fix_drag.txt
• fix_dt_reset.html
• fix_dt_reset.txt
• fix_efield.html
• fix_efield.txt
• fix_enforce2d.html
• fix_enforce2d.txt
• fix_evaporate.html
• fix_evaporate.txt
• fix_external.html
• fix_external.txt
• fix_freeze.html
• fix_freeze.txt
• fix_gcmc.html
• fix_gcmc.txt
• fix_gld.html
• fix_gld.txt
• fix_gravity.html
• fix_gravity.txt
• fix_heat.html
• fix_heat.txt
• fix_imd.html
• fix_imd.txt
• fix_indent.html
• fix_indent.txt
• fix_langevin.html
• fix_langevin.txt
• fix_langevin_eff.html
• fix_langevin_eff.txt
• fix_lb_fluid.html
• fix_lb_fluid.txt
• fix_lb_momentum.html
• fix_lb_momentum.txt
• fix_lb_pc.html
• fix_lb_pc.txt
• fix_lb_rigid_pc_sphere.html
• fix_lb_rigid_pc_sphere.txt
• fix_lb_viscous.html
• fix_lb_viscous.txt
• fix_lineforce.html
• fix_lineforce.txt
• fix_meso.html
• fix_meso.txt
• fix_meso_stationary.html
• fix_meso_stationary.txt
• fix_modify.html
• fix_modify.txt
• fix_momentum.html
• fix_momentum.txt
• fix_move.html
• fix_move.txt
• fix_msst.html
• fix_msst.txt
• fix_neb.html
• fix_neb.txt
• fix_nh.html
• fix_nh.txt
• fix_nh_eff.html
• fix_nh_eff.txt
• fix_nph_asphere.html
• fix_nph_asphere.txt
• fix_nph_sphere.html
• fix_nph_sphere.txt
• fix_nphug.html
• fix_nphug.txt
• fix_npt_asphere.html
• fix_npt_asphere.txt
• fix_npt_sphere.html
• fix_npt_sphere.txt
• fix_nve.html
• fix_nve.txt
• fix_nve_asphere.html
• fix_nve_asphere.txt
• fix_nve_asphere_noforce.html
• fix_nve_asphere_noforce.txt
• fix_nve_body.html
• fix_nve_body.txt
• fix_nve_eff.html
• fix_nve_eff.txt
• fix_nve_limit.html
• fix_nve_limit.txt
• fix_nve_line.html
• fix_nve_line.txt
• fix_nve_noforce.html
• fix_nve_noforce.txt
• fix_nve_sphere.html
• fix_nve_sphere.txt
• fix_nve_tri.html
• fix_nve_tri.txt
• fix_nvt_asphere.html
• fix_nvt_asphere.txt
• fix_nvt_sllod.html
• fix_nvt_sllod.txt
• fix_nvt_sllod_eff.html
• fix_nvt_sllod_eff.txt
• fix_nvt_sphere.html
• fix_nvt_sphere.txt
• fix_oneway.html
• fix_oneway.txt
• fix_orient_fcc.html
• fix_orient_fcc.txt
• fix_phonon.html
• fix_phonon.txt
• fix_planeforce.html
• fix_planeforce.txt
• fix_poems.html
• fix_poems.txt
• fix_pour.html
• fix_pour.txt
• fix_press_berendsen.html
• fix_press_berendsen.txt
• fix_print.html
• fix_print.txt
• fix_property_atom.html
• fix_property_atom.txt
• fix_qeq_comb.html
• fix_qeq_comb.txt
• fix_qeq_reax.html
• fix_qeq_reax.txt
• fix_qmmm.html
• fix_qmmm.txt
• fix_reax_bonds.html
• fix_reax_bonds.txt
• fix_reaxc_species.html
• fix_reaxc_species.txt
• fix_recenter.html
• fix_recenter.txt
• fix_restrain.html
• fix_restrain.txt
• fix_rigid.html
• fix_rigid.txt
• fix_setforce.html
• fix_setforce.txt
• fix_shake.html
• fix_shake.txt
• fix_smd.html
• fix_smd.txt
• fix_spring.html
• fix_spring.txt
• fix_spring_rg.html
• fix_spring_rg.txt
• fix_spring_self.html
• fix_spring_self.txt
• fix_srd.html
• fix_srd.txt
• fix_store_force.html
• fix_store_force.txt
• fix_store_state.html
• fix_store_state.txt
• fix_temp_berendsen.html
• fix_temp_berendsen.txt
• fix_temp_csvr.html
• fix_temp_csvr.txt
• fix_temp_rescale.html
• fix_temp_rescale.txt
• fix_temp_rescale_eff.html
• fix_temp_rescale_eff.txt
• fix_thermal_conductivity.html
• fix_thermal_conductivity.txt
• fix_ti_rs.html
• fix_ti_rs.txt
• fix_ti_spring.html
• fix_ti_spring.txt
• fix_tmd.html
• fix_tmd.txt
• fix_ttm.html
• fix_ttm.txt
• fix_tune_kspace.html
• fix_tune_kspace.txt
• fix_vector.html
• fix_vector.txt
• fix_viscosity.html
• fix_viscosity.txt
• fix_viscous.html
• fix_viscous.txt
• fix_wall.html
• fix_wall.txt
• fix_wall_gran.html
• fix_wall_gran.txt
• fix_wall_piston.html
• fix_wall_piston.txt
• fix_wall_reflect.html
• fix_wall_reflect.txt
• fix_wall_region.html
• fix_wall_region.txt
• fix_wall_srd.html
• fix_wall_srd.txt
• group.html
• group.txt
• group2ndx.html
• group2ndx.txt
• if.html
• if.txt
• improper_class2.html
• improper_class2.txt
• improper_coeff.html
• improper_coeff.txt
• improper_cossq.html
• improper_cossq.txt
• improper_cvff.html
• improper_cvff.txt
• improper_fourier.html
• improper_fourier.txt
• improper_harmonic.html
• improper_harmonic.txt
• improper_hybrid.html
• improper_hybrid.txt
• improper_none.html
• improper_none.txt
• improper_ring.html
• improper_ring.txt
• improper_style.html
• improper_style.txt
• improper_umbrella.html
• improper_umbrella.txt
• include.html
• include.txt
• jump.html
• jump.txt
• kspace_modify.html
• kspace_modify.txt
• kspace_style.html
• kspace_style.txt
• label.html
• label.txt
• lattice.html
• lattice.txt
• log.html
• log.txt
• Manual.html
• Manual.pdf
• Manual.txt
• mass.html
• mass.txt
• min_modify.html
• min_modify.txt
• min_style.html
• min_style.txt
• minimize.html
• minimize.txt
• molecule.html
• molecule.txt
• neb.html
• neb.txt
• neigh_modify.html
• neigh_modify.txt
• neighbor.html
• neighbor.txt
• newton.html
• newton.txt
• next.html
• next.txt
• package.html
• package.txt
• pair_adp.html
• pair_adp.txt
• pair_airebo.html
• pair_airebo.txt
• pair_awpmd.html
• pair_awpmd.txt
• pair_beck.html
• pair_beck.txt
• pair_body.html
• pair_body.txt
• pair_bop.html
• pair_bop.txt
• pair_born.html
• pair_born.txt
• pair_brownian.html
• pair_brownian.txt
• pair_buck.html
• pair_buck.txt
• pair_buck_long.html
• pair_buck_long.txt
• pair_charmm.html
• pair_charmm.txt
• pair_class2.html
• pair_class2.txt
• pair_coeff.html
• pair_coeff.txt
• pair_colloid.html
• pair_colloid.txt
• pair_comb.html
• pair_comb.txt
• pair_coul.html
• pair_coul.txt
• pair_coul_diel.html
• pair_coul_diel.txt
• pair_dipole.html
• pair_dipole.txt
• pair_dpd.html
• pair_dpd.txt
• pair_dsmc.html
• pair_dsmc.txt
• pair_eam.html
• pair_eam.txt
• pair_edip.html
• pair_edip.txt
• pair_eff.html
• pair_eff.txt
• pair_eim.html
• pair_eim.txt
• pair_gauss.html
• pair_gauss.txt
• pair_gayberne.html
• pair_gayberne.txt
• pair_gran.html
• pair_gran.txt
• pair_gromacs.html
• pair_gromacs.txt
• pair_hbond_dreiding.html
• pair_hbond_dreiding.txt
• pair_hybrid.html
• pair_hybrid.txt
• pair_kim.html
• pair_kim.txt
• pair_lcbop.html
• pair_lcbop.txt
• pair_line_lj.html
• pair_line_lj.txt
• pair_list.html
• pair_list.txt
• pair_lj.html
• pair_lj.txt
• pair_lj96.html
• pair_lj96.txt
• pair_lj_cubic.html
• pair_lj_cubic.txt
• pair_lj_cut_smooth.html
• pair_lj_expand.html
• pair_lj_expand.txt
• pair_lj_long.html
• pair_lj_long.txt
• pair_lj_sf.html
• pair_lj_sf.txt
• pair_lj_smooth.html
• pair_lj_smooth.txt
• pair_lj_smooth_linear.html
• pair_lj_smooth_linear.txt
• pair_lubricate.html
• pair_lubricate.txt
• pair_lubricateU.html
• pair_lubricateU.txt
• pair_meam.html
• pair_meam.txt
• pair_meam_spline.html
• pair_meam_spline.txt
• pair_meam_sw_spline.html
• pair_meam_sw_spline.txt
• pair_mie.html
• pair_mie.txt
• pair_modify.html
• pair_modify.txt
• pair_morse.html
• pair_morse.txt
• pair_nb3b_harmonic.html
• pair_nb3b_harmonic.txt
• pair_nm.html
• pair_nm.txt
• pair_none.html
• pair_none.txt
• pair_peri.html
• pair_peri.txt
• pair_reax.html
• pair_reax.txt
• pair_reax_c.html
• pair_reax_c.txt
• pair_resquared.html
• pair_resquared.txt
• pair_sdk.html
• pair_sdk.txt
• pair_soft.html
• pair_soft.txt
• pair_sph_heatconduction.html
• pair_sph_heatconduction.txt
• pair_sph_idealgas.html
• pair_sph_idealgas.txt
• pair_sph_lj.html
• pair_sph_lj.txt
• pair_sph_rhosum.html
• pair_sph_rhosum.txt
• pair_sph_taitwater.html
• pair_sph_taitwater.txt
• pair_sph_taitwater_morris.html
• pair_sph_taitwater_morris.txt
• pair_style.html
• pair_style.txt
• pair_sw.html
• pair_sw.txt
• pair_table.html
• pair_table.txt
• pair_tersoff.html
• pair_tersoff.txt
• pair_tersoff_mod.html
• pair_tersoff_mod.txt
• pair_tersoff_zbl.html
• pair_tersoff_zbl.txt
• pair_tri_lj.html
• pair_tri_lj.txt
• pair_write.html
• pair_write.txt
• pair_yukawa.html
• pair_yukawa.txt
• pair_yukawa_colloid.html
• pair_yukawa_colloid.txt
• pair_zbl.html
• pair_zbl.txt
• partition.html
• partition.txt
• prd.html
• prd.txt
• print.html
• print.txt
• processors.html
• processors.txt
• quit.html
• quit.txt
• read_data.html
• read_data.txt
• read_dump.html
• read_dump.txt
• read_restart.html
• read_restart.txt
• region.html
• region.txt
• replicate.html
• replicate.txt
• rerun.html
• rerun.txt
• reset_timestep.html
• reset_timestep.txt
• restart.html
• restart.txt
• run.html
• run.txt
• run_style.html
• run_style.txt
• Section_accelerate.html
• Section_accelerate.txt
• Section_commands.html
• Section_commands.txt
• Section_errors.html
• Section_errors.txt
• Section_example.html
• Section_example.txt
• Section_history.html
• Section_history.txt
• Section_howto.html
• Section_howto.txt
• Section_intro.html
• Section_intro.txt
• Section_modify.html
• Section_modify.txt
• Section_packages.html
• Section_packages.txt
• Section_perf.html
• Section_perf.txt
• Section_python.html
• Section_python.txt
• Section_start.html
• Section_start.txt
• Section_tools.html
• Section_tools.txt
• set.html
• set.txt
• shell.html
• shell.txt
• special_bonds.html
• special_bonds.txt
• suffix.html
• suffix.txt
• tad.html
• tad.txt
• temper.html
• temper.txt
• thermo.html
• thermo.txt
• thermo_modify.html
• thermo_modify.txt
• thermo_style.html
• thermo_style.txt
• timestep.html
• timestep.txt
• uncompute.html
• uncompute.txt
• undump.html
• undump.txt
• unfix.html
• unfix.txt
• units.html
• units.txt
• variable.html
• variable.txt
• velocity.html
• velocity.txt
• write_data.html
• write_data.txt
• write_dump.html
• write_dump.txt
• write_restart.html
• write_restart.txt