#include "miniasm.h"
int ma_verbose = 3;
void ma_opt_init(ma_opt_t *opt)
{
opt->min_span = 2000;
opt->min_match = 100;
opt->min_dp = 3;
opt->min_iden = .05;
opt->cov_ratio = 0.;
opt->max_hang = 1000;
opt->min_ovlp = opt->min_span;
opt->int_frac = .8;
opt->gap_fuzz = 1000;
opt->n_rounds = 2;
opt->bub_dist = 50000;
opt->max_ext = 4;
opt->min_ovlp_drop_ratio = .5;
opt->max_ovlp_drop_ratio = .7;
opt->final_ovlp_drop_ratio = .8;
}