Codebase list r-cran-broom / debian/0.5.6+dfsg-2 README.md
debian/0.5.6+dfsg-2

Tree @debian/0.5.6+dfsg-2 (Download .tar.gz)

README.md @debian/0.5.6+dfsg-2raw · history · blame

<!-- README.md is generated from README.Rmd. Please edit that file -->

# broom <img src="man/figures/logo.png" align="right" width="100" height="100" />

[![CRAN
status](https://www.r-pkg.org/badges/version/broom)](https://cran.r-project.org/package=broom)
[![Travis-CI Build
Status](https://travis-ci.org/tidyverse/broom.svg?branch=master)](https://travis-ci.org/tidyverse/broom)
[![AppVeyor Build
Status](https://ci.appveyor.com/api/projects/status/github/tidyverse/broom?branch=master&svg=true)](https://ci.appveyor.com/project/tidyverse/broom)

## Overview

broom summarizes key information about models in tidy `tibble()`s. broom
provides three verbs to make it convenient to interact with model
objects:

  - `tidy()` summarizes information about model components
  - `glance()` reports information about the entire model
  - `augment()` adds informations about observations to a dataset

For a detailed introduction, please see `vignette("broom")`.

broom tidies 100+ models from popular modelling packages and almost all
of the model objects in the `stats` package that comes with base R.
`vignette("available-methods")` lists method availabilty.

If you aren’t familiar with tidy data structures and want to know how
they can make your life easier, we highly recommend reading Hadley
Wickham’s [Tidy Data](http://www.jstatsoft.org/v59/i10).

## Installation

``` r
# we recommend installing the entire tidyverse, which includes broom:
install.packages("tidyverse")

# alternatively, to install just broom:
install.packages("broom")

# to get the development version from GitHub:
install.packages("devtools")
devtools::install_github("tidyverse/broom")
```

If you find a bug, please file a minimal reproducible example in the
[issues](https://github.com/tidyverse/broom/issues).

## Usage

`tidy()` produces a `tibble()` where each row contains information about
an important component of the model. For regression models, this often
corresponds to regression coefficients. This is can be useful if you
want to inspect a model or create custom visualizations.

``` r
library(broom)

fit <- lm(Sepal.Width ~ Petal.Length + Petal.Width, iris)
tidy(fit)
#> # A tibble: 3 x 5
#>   term         estimate std.error statistic  p.value
#>   <chr>           <dbl>     <dbl>     <dbl>    <dbl>
#> 1 (Intercept)     3.59     0.0937     38.3  2.51e-78
#> 2 Petal.Length   -0.257    0.0669     -3.84 1.80e- 4
#> 3 Petal.Width     0.364    0.155       2.35 2.01e- 2
```

`glance()` returns a tibble with exactly one row of goodness of fitness
measures and related statistics. This is useful to check for model
misspecification and to compare many models.

``` r
glance(fit)
#> # A tibble: 1 x 12
#>   r.squared adj.r.squared sigma statistic p.value    df logLik   AIC   BIC
#>       <dbl>         <dbl> <dbl>     <dbl>   <dbl> <dbl>  <dbl> <dbl> <dbl>
#> 1     0.213         0.202 0.389      19.9 2.24e-8     2  -69.8  148.  160.
#> # … with 3 more variables: deviance <dbl>, df.residual <int>, nobs <int>
```

`augment` adds columns to a dataset, containing information such as
fitted values, residuals or cluster assignments. All columns added to a
dataset have `.` prefix to prevent existing columns from being
overwritten.

``` r
augment(fit, data = iris)
#> # A tibble: 150 x 11
#>    Sepal.Length Sepal.Width Petal.Length Petal.Width Species .fitted  .resid
#>           <dbl>       <dbl>        <dbl>       <dbl> <fct>     <dbl>   <dbl>
#>  1          5.1         3.5          1.4         0.2 setosa     3.30 -0.200 
#>  2          4.9         3            1.4         0.2 setosa     3.30  0.300 
#>  3          4.7         3.2          1.3         0.2 setosa     3.33  0.126 
#>  4          4.6         3.1          1.5         0.2 setosa     3.27  0.174 
#>  5          5           3.6          1.4         0.2 setosa     3.30 -0.300 
#>  6          5.4         3.9          1.7         0.4 setosa     3.30 -0.604 
#>  7          4.6         3.4          1.4         0.3 setosa     3.34 -0.0637
#>  8          5           3.4          1.5         0.2 setosa     3.27 -0.126 
#>  9          4.4         2.9          1.4         0.2 setosa     3.30  0.400 
#> 10          4.9         3.1          1.5         0.1 setosa     3.24  0.138 
#> # … with 140 more rows, and 4 more variables: .std.resid <dbl>, .hat <dbl>,
#> #   .sigma <dbl>, .cooksd <dbl>
```

### Contributing

We welcome contributions of all types\!

If you have never made a pull request to an R package before, broom is
an excellent place to start. Find an
[issue](https://github.com/tidyverse/broom/issues/) with the **Beginner
Friendly** tag and comment that you’d like to take it on and we’ll help
you get started.

We encourage typo corrections, bug reports, bug fixes and feature
requests. Feedback on the clarity of the documentation is especially
valuable.

If you are interested in adding new tidiers methods to broom, please
read `vignette("adding-tidiers")`.

We have a [Contributor Code of
Conduct](https://github.com/tidymodels/broom/blob/master/.github/CODE_OF_CONDUCT.md).
By participating in broom you agree to abide by its terms.