/*
 *            Copyright 2009-2020 The VOTCA Development Team
 *                       (http://www.votca.org)
 *
 *      Licensed under the Apache License, Version 2.0 (the "License")
 *
 * You may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *              http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 *
 */

#pragma once
#ifndef VOTCA_XTP_DENSITYANALYSIS_H
#define VOTCA_XTP_DENSITYANALYSIS_H

// Standard includes
#include <cstdio>

// Third party includes
#include <boost/filesystem.hpp>

// Local VOTCA includes
#include "votca/xtp/gyration.h"
#include "votca/xtp/logger.h"

namespace votca {
namespace xtp {

class DensityAnalysis final : public QMTool {
 public:
  std::string Identify() { return "densityanalysis"; }

 protected:
  void ParseOptions(const tools::Property& user_options);
  bool Run();

 private:
  std::string _orbfile;
  std::string _output_file;
  tools::Property _gyration_options;

  Logger _log;
};

void DensityAnalysis::ParseOptions(const tools::Property& options) {

  _orbfile = options.ifExistsReturnElseReturnDefault<std::string>(
      ".input", _job_name + ".orb");

  _gyration_options = options.get(".density2gyration");
}

bool DensityAnalysis::Run() {
  _log.setReportLevel(Log::current_level);
  _log.setMultithreading(true);

  _log.setCommonPreface("\n... ...");

  Orbitals orbitals;
  XTP_LOG(Log::error, _log)
      << " Loading QM data from " << _orbfile << std::flush;
  orbitals.ReadFromCpt(_orbfile);

  Density2Gyration density2gyration(_log);
  density2gyration.Initialize(_gyration_options);
  density2gyration.AnalyzeDensity(orbitals);

  return true;
}

}  // namespace xtp
}  // namespace votca

#endif  // VOTCA_XTP_DENSITYANALYSIS_H