Lintian Fixes - tvc

• QA Page
• Maintainer email: debian-med-packaging@lists.alioth.debian.org
• Automatic publish policy: main: push-derived , pristine-tar: push-derived , upstream: push-derived
• Last processed: 2023-06-23T18:41 (took 35s)
• Branch URL: https://salsa.debian.org/med-team/tvc.git -b master (taken from version 5.0.3+git20151221.80e144e+dfsg-5)
• Tags that might be fixable: mismatched-override debian-watch-does-not-check-openpgp-signature upstream-metadata-missing-repository
• Queue position: 81573 (a 39w2d wait)

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Summary

• Use secure URI in Homepage field. ( homepage-field-uses-insecure-uri )
• Set upstream metadata fields: Repository-Browse.
• Update standards version to 4.6.2, no changes needed. ( out-of-date-standards-version )

Lintian Result

• tvc-dbgsym_5.0.3+git20151221.80e144e+dfsg-6~jan+lint1_amd64.deb
• tvc_5.0.3+git20151221.80e144e+dfsg-6~jan+lint1.dsc
• tvc_5.0.3+git20151221.80e144e+dfsg-6~jan+lint1_amd64.buildinfo
• tvc_5.0.3+git20151221.80e144e+dfsg-6~jan+lint1_amd64.deb
• tvc_5.0.3+git20151221.80e144e+dfsg-6~jan+lint1_amd64.changes

Diff

diff --git a/debian/changelog b/debian/changelog
index 5ff17d8..dd3d566 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,11 @@
+tvc (5.0.3+git20151221.80e144e+dfsg-6) UNRELEASED; urgency=medium
+
+  * Use secure URI in Homepage field.
+  * Set upstream metadata fields: Repository-Browse.
+  * Update standards version to 4.6.2, no changes needed.
+
+ -- Debian Janitor <janitor@jelmer.uk>  Tue, 28 Mar 2023 01:48:48 -0000
+
 tvc (5.0.3+git20151221.80e144e+dfsg-5) unstable; urgency=medium
 
   * Team upload.
diff --git a/debian/control b/debian/control
index 7482cea..b44f36c 100644
--- a/debian/control
+++ b/debian/control
@@ -11,10 +11,10 @@ Build-Depends: debhelper-compat (= 13),
                libarmadillo-dev,
                libboost-math-dev,
                libsmithwaterman-dev
-Standards-Version: 4.6.1
+Standards-Version: 4.6.2
 Vcs-Browser: https://salsa.debian.org/med-team/tvc
 Vcs-Git: https://salsa.debian.org/med-team/tvc.git
-Homepage: http://ioncommunity.thermofisher.com
+Homepage: https://ioncommunity.thermofisher.com
 Rules-Requires-Root: no
 
 Package: tvc
diff --git a/debian/upstream/metadata b/debian/upstream/metadata
index 5fa33e5..bb0ecf9 100644
--- a/debian/upstream/metadata
+++ b/debian/upstream/metadata
@@ -9,3 +9,4 @@ Registry:
    Entry: NA
  - Name: conda:bioconda
    Entry: NA
+Repository-Browse: https://github.com/domibel/IonTorrent-VariantCaller

Debdiff

[The following lists of changes regard files as different if they have different names, permissions or owners.]

Files in second set of .debs but not in first

-rw-r--r--  root/root   /usr/lib/debug/.build-id/0a/f7a5968551a0b14eca08542f010c6a99ccaf68.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/61/3b429313597e6533aa7f80ae5d78456f19a1dc.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/d6/638131113e0d16e871499254d13ff3e9891546.debug

Files in first set of .debs but not in second

-rw-r--r--  root/root   /usr/lib/debug/.build-id/4b/545e03e3b50162f0a924cd88433eee3d8ebfe6.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/64/7d474394d3319f734d3b21819ec184c11d3979.debug
-rw-r--r--  root/root   /usr/lib/debug/.build-id/71/05466d9a728ace9918700f74ddf5cdfa376aed.debug

Control files of package tvc: lines which differ (wdiff format)

• Depends: libarmadillo11 (>= 1:11.2.3+dfsg), 1:11.4.2+dfsg), libbamtools2.5.2 (>= 2.5.2+dfsg), libc6 (>= 2.34), libdisorder0 (>= 0.0.2), libgcc-s1 (>= 3.0), libjsoncpp25 (>= 1.9.5), libsmithwaterman0 (>= 0.0+git20160702.2610e25), libstdc++6 (>= 11), zlib1g (>= 1:1.1.4), python3

• Homepage: http://ioncommunity.thermofisher.com https://ioncommunity.thermofisher.com

Control files of package tvc-dbgsym: lines which differ (wdiff format)

• Build-Ids: 4b545e03e3b50162f0a924cd88433eee3d8ebfe6 647d474394d3319f734d3b21819ec184c11d3979 7105466d9a728ace9918700f74ddf5cdfa376aed 0af7a5968551a0b14eca08542f010c6a99ccaf68 613b429313597e6533aa7f80ae5d78456f19a1dc d6638131113e0d16e871499254d13ff3e9891546

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